PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ000087 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ000792 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ001772 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ002818 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003100 Flavonoid F3H medium pass
silene_latifolia_GWHPCBIJ003176 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003205 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ003279 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003281 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ003284 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003305 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003307 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ003310 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003473 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003474 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003475 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003476 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003477 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003478 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003479 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003480 Flavonoid F3H medium pass
silene_latifolia_GWHPCBIJ003481 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003483 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003485 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003486 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003487 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ003488 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003489 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003495 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ003496 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ004408 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ004409 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ004414 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ004415 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ004416 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ004417 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ004418 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ005068 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ005601 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ005889 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ005890 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ005916 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ005940 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ005941 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ005942 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ005944 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ005945 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ006504 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ006505 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ006506 Flavonoid F3H medium borderline