PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ006510 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ006511 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ006640 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ006641 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ006644 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ006969 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ007007 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ007008 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ007030 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ007087 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ007861 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ007862 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ007892 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ009093 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ009871 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ010049 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ010939 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ011558 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ011562 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ011849 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ012922 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ013479 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ013858 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ014228 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ015394 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ015662 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ015797 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ015798 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ016088 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ016370 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ016872 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ016892 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ017716 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ018237 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ018241 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ018523 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ020267 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ020687 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ020763 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ021531 Flavonoid F3H medium pass
silene_latifolia_GWHPCBIJ021708 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ021887 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ022021 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ022492 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ022655 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ023644 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ023647 Flavonoid F3H low borderline
silene_latifolia_GWHPCBIJ023965 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ024404 Flavonoid F3H medium borderline
silene_latifolia_GWHPCBIJ024470 Flavonoid F3H medium borderline