PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ018253 Flavonoid F3'H/CYP75B low borderline
silene_latifolia_GWHPCBIJ019082 Flavonoid F3'H/CYP75B low borderline
silene_latifolia_GWHPCBIJ021000 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ021621 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ021691 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ021807 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ022866 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ022867 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ022872 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ022894 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ023666 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ023771 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ023962 Flavonoid F3'H/CYP75B low borderline
silene_latifolia_GWHPCBIJ025731 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ025853 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ025855 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ026714 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ026715 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ027125 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ027164 Flavonoid F3'H/CYP75B low borderline
silene_latifolia_GWHPCBIJ028751 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ030495 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ031107 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ031129 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ031593 Flavonoid F3'H/CYP75B low borderline
silene_latifolia_GWHPCBIJ032754 Flavonoid F3'H/CYP75B low borderline
silene_latifolia_GWHPCBIJ032988 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ033001 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ035363 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ035808 Flavonoid F3'H/CYP75B low borderline
silene_latifolia_GWHPCBIJ036982 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ037148 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ037150 Flavonoid F3'H/CYP75B medium borderline
silene_latifolia_GWHPCBIJ037151 Flavonoid F3'H/CYP75B medium borderline