PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ000017 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ000199 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ000454 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ000518 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ000520 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ000521 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ000523 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ000526 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ000528 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ000566 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ000620 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ000653 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ000682 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ000929 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ001227 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ002392 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ002456 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ002826 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ003018 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ003139 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ003231 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ003268 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ003273 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ005301 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ005908 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ006182 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ006405 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ006406 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ007056 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ007146 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ007147 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ007601 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ007657 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ008032 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ008990 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ009055 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ009115 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ009372 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ009508 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ009509 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ009684 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ009685 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ009805 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ009806 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ009883 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ009886 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ010245 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ010455 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ010953 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ011176 Flavonoid IFS low borderline