PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ023430 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ023438 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ023665 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ023667 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ023669 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ023901 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ024119 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ024451 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ025237 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ025730 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ026085 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ026291 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ027412 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ027501 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ027504 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ027719 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ027722 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ028020 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ028082 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ028087 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ028222 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ028481 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ029301 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ030544 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ031308 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ031309 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ031310 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ031311 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ031312 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ031313 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ032441 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ032442 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ032794 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ032994 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ034481 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ034484 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ034488 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ034500 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ034675 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ034903 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ035140 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ035364 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ035365 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ035369 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ035370 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ035659 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ035796 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ035797 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ036122 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ036351 Flavonoid IFS low borderline