PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ000199 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ000224 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ000518 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ000520 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ000521 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ000523 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ000526 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ000528 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ000533 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ000566 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ000620 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ000682 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ001227 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ002456 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ002457 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ003018 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ003229 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ003231 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ003273 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ004923 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ005572 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ005904 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ005905 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ005908 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ006074 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ006182 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ007146 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ007601 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ007657 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ009055 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ009115 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ009131 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ009372 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ009508 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ009509 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ009684 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ009685 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ009806 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ010245 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ010953 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ011177 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ011526 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ011626 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ011683 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ011694 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ011695 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ012939 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ012950 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ012951 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ013159 Alkaloid T3O medium pass