PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ013167 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ013170 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ013171 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ013172 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ013173 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ013434 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ013723 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ015639 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ015805 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ015930 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ015931 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ015965 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ016525 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ017072 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ017503 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ017708 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ018439 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ019514 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ019675 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ019680 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ021431 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ021432 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ021621 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ022090 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ022338 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ022422 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ022866 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ022867 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ022870 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ022872 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ022894 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ022895 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ023322 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ023420 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ023422 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ023430 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ023434 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ023438 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ023665 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ023667 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ023669 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ024119 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ025237 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ025730 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ025731 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ025853 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ026509 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ026714 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ026715 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ027125 Alkaloid T3O medium pass