PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ027158 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ027501 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ027504 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ027719 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ027722 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ028082 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ028481 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ029301 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ029308 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ030495 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ030544 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ031107 Alkaloid T3O high pass
silene_latifolia_GWHPCBIJ031308 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ031309 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ031310 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ031311 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ031312 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ031313 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ032441 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ032442 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ032994 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ032996 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ034481 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ034484 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ034488 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ034500 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ034675 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ034903 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ035140 Alkaloid T3O low borderline
silene_latifolia_GWHPCBIJ035363 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ035364 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ035365 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ035369 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ035370 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ035497 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ035659 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ035998 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ036122 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ036237 Alkaloid T3O medium pass
silene_latifolia_GWHPCBIJ036812 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ036981 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ036982 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ037148 Alkaloid T3O medium borderline
silene_latifolia_GWHPCBIJ037151 Alkaloid T3O medium borderline