PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ000575 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ001645 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ001954 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ002270 Flavonoid UFGT low borderline
silene_latifolia_GWHPCBIJ002329 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ002338 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ002375 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ002678 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ002679 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ002822 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ002824 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ002959 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ003226 Flavonoid UFGT low borderline
silene_latifolia_GWHPCBIJ003228 Flavonoid UFGT low borderline
silene_latifolia_GWHPCBIJ003470 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ004678 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ004878 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ005057 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ005087 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ005460 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ005711 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ005802 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ006157 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ006340 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ006461 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ006642 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ006643 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ007159 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ007505 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ007767 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ007768 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ007770 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ008409 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ008439 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ009091 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ009156 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ010155 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ010270 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ010352 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ010846 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ010861 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ010968 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ011025 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ011027 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ011028 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ011029 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ011030 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ011031 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ011239 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ011412 Flavonoid UFGT high pass