PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ024881 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ025161 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ025185 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ025223 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ025781 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ025786 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ025788 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ025915 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ026340 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ026574 Flavonoid UFGT low borderline
silene_latifolia_GWHPCBIJ027008 Flavonoid UFGT low borderline
silene_latifolia_GWHPCBIJ027013 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ027243 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ027294 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ027796 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ027868 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ028015 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ028295 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ028317 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ028942 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ028943 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ028944 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ028945 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ028946 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ028947 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ029204 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ029231 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ029232 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ029233 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ029234 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ029258 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ029259 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ029283 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ029284 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ029285 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ029286 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ029287 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ029486 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ029498 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ030484 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ030582 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ031027 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ031028 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ031161 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ031466 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ031467 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ031468 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ031469 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ031470 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ031471 Flavonoid UFGT medium pass