PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

2119
Candidate Protein Records
1810
Pathway-Level Records
4435
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
silene_latifolia_GWHPCBIJ032412 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
silene_latifolia_GWHPCBIJ032435 Phenylpropanoid POD low borderline POD__00012__sp_Q10N21_APX1_ORYSJ
silene_latifolia_GWHPCBIJ032925 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
silene_latifolia_GWHPCBIJ033076 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
silene_latifolia_GWHPCBIJ033367 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
silene_latifolia_GWHPCBIJ033432 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
silene_latifolia_GWHPCBIJ033621 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
silene_latifolia_GWHPCBIJ033625 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
silene_latifolia_GWHPCBIJ033790 Phenylpropanoid POD low borderline POD__00002__sp_A5H8G4_PER1_MAIZE
silene_latifolia_GWHPCBIJ034009 Phenylpropanoid POD low borderline POD__00019__sp_Q949Y3_PPA26_ARATH
silene_latifolia_GWHPCBIJ034657 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
silene_latifolia_GWHPCBIJ034778 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
silene_latifolia_GWHPCBIJ034785 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
silene_latifolia_GWHPCBIJ034866 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
silene_latifolia_GWHPCBIJ034896 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
silene_latifolia_GWHPCBIJ034897 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
silene_latifolia_GWHPCBIJ034898 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
silene_latifolia_GWHPCBIJ035155 Phenylpropanoid POD low borderline POD__00027__sp_Q9XIV8_PERN1_TOBAC
silene_latifolia_GWHPCBIJ035156 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
silene_latifolia_GWHPCBIJ035514 Phenylpropanoid POD low borderline POD__00012__sp_Q10N21_APX1_ORYSJ
silene_latifolia_GWHPCBIJ035556 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
silene_latifolia_GWHPCBIJ035866 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
silene_latifolia_GWHPCBIJ035867 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
silene_latifolia_GWHPCBIJ035954 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
silene_latifolia_GWHPCBIJ037179 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
silene_latifolia_GWHPCBIJ037266 Phenylpropanoid POD medium pass POD__00015__sp_Q69SV0_APX8_ORYSJ
silene_latifolia_GWHPCBIJ037471 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE