PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ006642 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ006643 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ007159 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ007505 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ007767 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ007768 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ007770 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ008409 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ008439 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ009091 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ009156 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ010155 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ010270 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ010352 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ010846 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ010861 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ010968 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ011025 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ011027 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ011028 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ011029 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ011030 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ011031 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ011239 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ011412 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ011614 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ013300 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ013473 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ013820 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ013903 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ013987 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ013996 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ013998 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ014162 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ014179 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ016092 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ016436 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ016437 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ016498 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ016543 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ017642 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ017754 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ017775 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ017891 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ017930 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ018102 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ018131 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ019236 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ019241 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ019255 Alkaloid 7DLGT medium pass