PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ029204 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ029231 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ029232 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ029233 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ029234 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ029258 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ029259 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ029283 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ029284 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ029285 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ029286 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ029287 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ029486 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ029498 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ030484 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ030582 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ031027 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ031028 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ031161 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ031466 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ031467 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ031468 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ031469 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ031470 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ031471 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ031473 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ031583 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ031584 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ031585 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ031762 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ032037 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ032038 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ032039 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ032263 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ032268 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ032528 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ033291 Alkaloid 7DLGT high pass
silene_latifolia_GWHPCBIJ034749 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ035283 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ035285 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ035289 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ035290 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ035430 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ035671 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ035672 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ035673 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ035690 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ035691 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ035692 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ036462 Alkaloid 7DLGT medium pass