PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ032176 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ032185 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ032456 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ032865 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ032913 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ033244 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ033809 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ034261 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ034462 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ034540 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ035382 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ035399 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ035446 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ035491 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ035702 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ035703 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ035717 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ035749 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ036326 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ036418 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ036431 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ036783 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ036806 Terpenoid BAHD low borderline
silene_latifolia_GWHPCBIJ037027 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ037159 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ037248 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ037510 Terpenoid BAHD medium pass
silene_latifolia_GWHPCBIJ026401 Terpenoid CMK/IspE low borderline
silene_latifolia_GWHPCBIJ000036 Terpenoid CYP71 medium pass
silene_latifolia_GWHPCBIJ000518 Terpenoid CYP71 medium borderline
silene_latifolia_GWHPCBIJ000521 Terpenoid CYP71 medium borderline
silene_latifolia_GWHPCBIJ000523 Terpenoid CYP71 medium borderline
silene_latifolia_GWHPCBIJ000533 Terpenoid CYP71 medium borderline
silene_latifolia_GWHPCBIJ001227 Terpenoid CYP71 low borderline
silene_latifolia_GWHPCBIJ002457 Terpenoid CYP71 medium borderline
silene_latifolia_GWHPCBIJ004923 Terpenoid CYP71 medium borderline
silene_latifolia_GWHPCBIJ005876 Terpenoid CYP71 low borderline
silene_latifolia_GWHPCBIJ005992 Terpenoid CYP71 medium pass
silene_latifolia_GWHPCBIJ006580 Terpenoid CYP71 medium pass
silene_latifolia_GWHPCBIJ006615 Terpenoid CYP71 medium pass
silene_latifolia_GWHPCBIJ006629 Terpenoid CYP71 medium pass
silene_latifolia_GWHPCBIJ008657 Terpenoid CYP71 low borderline
silene_latifolia_GWHPCBIJ009044 Terpenoid CYP71 medium pass
silene_latifolia_GWHPCBIJ009107 Terpenoid CYP71 medium pass
silene_latifolia_GWHPCBIJ009508 Terpenoid CYP71 medium borderline
silene_latifolia_GWHPCBIJ009509 Terpenoid CYP71 medium borderline
silene_latifolia_GWHPCBIJ011645 Terpenoid CYP71 low borderline
silene_latifolia_GWHPCBIJ013167 Terpenoid CYP71 medium borderline
silene_latifolia_GWHPCBIJ013170 Terpenoid CYP71 medium borderline
silene_latifolia_GWHPCBIJ013507 Terpenoid CYP71 medium pass