PlantSME Plant secondary metabolism enzyme database

Theobroma cacao (theobroma_cacao)

Imported from atlas release summary for Theobroma cacao.

2555
Candidate Protein Records
2109
Pathway-Level Records
5264
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 617 19 BAHD (254) View species results
Alkaloid pathway 471 22 7DLGT (91) View species results
Phenylpropanoid pathway 442 11 POD (197) View species results
Flavonoid pathway 246 9 UFGT (165) View species results
Rosmarinic acid pathway 193 7 C4H (70) View species results
Steroid pathway 140 13 CAS (70) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1997 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Protein/Isoform Record Pathway Family Confidence Status
Tcac01G0010840.1 Flavonoid F3'H/CYP75B medium borderline
Tcac01G0010980.1 Flavonoid F3'H/CYP75B medium borderline
Tcac01G0014980.1 Flavonoid F3'H/CYP75B medium borderline
Tcac01G0018470.1 Flavonoid F3'H/CYP75B medium borderline
Tcac01G0018470.2 Flavonoid F3'H/CYP75B medium borderline
Tcac01G0020700.1 Flavonoid F3'H/CYP75B medium borderline
Tcac01G0024320.1 Flavonoid F3'H/CYP75B low borderline
Tcac01G0030230.1 Flavonoid F3'H/CYP75B low borderline
Tcac01G0030230.2 Flavonoid F3'H/CYP75B low borderline
Tcac01G0031200.1 Flavonoid F3'H/CYP75B medium borderline
Tcac01G0037430.1 Flavonoid F3'H/CYP75B low borderline
Tcac01G0037440.1 Flavonoid F3'H/CYP75B low borderline
Tcac02G0002720.1 Flavonoid F3'H/CYP75B medium borderline
Tcac02G0029650.1 Flavonoid F3'H/CYP75B low borderline
Tcac02G0029680.1 Flavonoid F3'H/CYP75B low borderline
Tcac02G0029680.2 Flavonoid F3'H/CYP75B low borderline
Tcac02G0029720.1 Flavonoid F3'H/CYP75B medium borderline
Tcac02G0029720.2 Flavonoid F3'H/CYP75B medium borderline
Tcac02G0030080.1 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0003000.1 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0003020.1 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0006220.1 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0006220.2 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0006220.3 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0006220.4 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0006220.5 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0006220.6 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0008420.1 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0008430.1 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0009900.1 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0013980.1 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0014060.1 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0023680.1 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0023680.2 Flavonoid F3'H/CYP75B medium borderline
Tcac03G0023680.3 Flavonoid F3'H/CYP75B medium borderline
Tcac04G0001740.1 Flavonoid F3'H/CYP75B low borderline
Tcac04G0003360.1 Flavonoid F3'H/CYP75B low borderline
Tcac04G0006160.1 Flavonoid F3'H/CYP75B medium borderline
Tcac04G0010020.1 Flavonoid F3'H/CYP75B medium borderline
Tcac04G0010810.1 Flavonoid F3'H/CYP75B medium borderline
Tcac04G0010820.1 Flavonoid F3'H/CYP75B medium borderline
Tcac04G0011790.1 Flavonoid F3'H/CYP75B low borderline
Tcac04G0013650.1 Flavonoid F3'H/CYP75B medium borderline
Tcac04G0019930.1 Flavonoid F3'H/CYP75B medium borderline
Tcac05G0007690.1 Flavonoid F3'H/CYP75B medium borderline
Tcac05G0011020.1 Flavonoid F3'H/CYP75B medium borderline
Tcac05G0018360.1 Flavonoid F3'H/CYP75B medium borderline
Tcac05G0019910.1 Flavonoid F3'H/CYP75B medium borderline
Tcac05G0019950.1 Flavonoid F3'H/CYP75B medium borderline
Tcac05G0019990.1 Flavonoid F3'H/CYP75B medium borderline