PlantSME Plant secondary metabolism enzyme database

Theobroma cacao (theobroma_cacao)

Imported from atlas release summary for Theobroma cacao.

2555
Candidate Protein Records
2109
Pathway-Level Records
5264
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 617 19 BAHD (254) View species results
Alkaloid pathway 471 22 7DLGT (91) View species results
Phenylpropanoid pathway 442 11 POD (197) View species results
Flavonoid pathway 246 9 UFGT (165) View species results
Rosmarinic acid pathway 193 7 C4H (70) View species results
Steroid pathway 140 13 CAS (70) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1997 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Protein/Isoform Record Pathway Family Confidence Status
Tcac08G0008970.1 Flavonoid IFS medium borderline
Tcac08G0008980.1 Flavonoid IFS medium borderline
Tcac08G0008980.2 Flavonoid IFS medium borderline
Tcac08G0009060.1 Flavonoid IFS medium borderline
Tcac08G0009080.1 Flavonoid IFS medium borderline
Tcac08G0009100.1 Flavonoid IFS medium borderline
Tcac08G0009110.1 Flavonoid IFS medium borderline
Tcac08G0014210.1 Flavonoid IFS medium borderline
Tcac08G0014770.1 Flavonoid IFS low borderline
Tcac08G0014780.1 Flavonoid IFS low borderline
Tcac08G0015200.1 Flavonoid IFS low borderline
Tcac08G0017390.1 Flavonoid IFS medium borderline
Tcac08G0017590.1 Flavonoid IFS medium borderline
Tcac08G0017600.1 Flavonoid IFS medium borderline
Tcac08G0017950.1 Flavonoid IFS low borderline
Tcac08G0017960.1 Flavonoid IFS low borderline
Tcac08G0017990.1 Flavonoid IFS low borderline
Tcac08G0018240.1 Flavonoid IFS medium borderline
Tcac09G0000060.1 Flavonoid IFS low borderline
Tcac09G0000060.2 Flavonoid IFS low borderline
Tcac09G0007490.1 Flavonoid IFS medium borderline
Tcac09G0007490.2 Flavonoid IFS medium borderline
Tcac09G0007790.1 Flavonoid IFS low borderline
Tcac09G0019070.1 Flavonoid IFS low borderline
Tcac09G0020590.1 Flavonoid IFS medium borderline
Tcac09G0022610.1 Flavonoid IFS medium borderline
Tcac09G0023110.1 Flavonoid IFS low borderline
Tcac09G0026460.1 Flavonoid IFS low borderline
Tcac09G0028200.1 Flavonoid IFS low borderline
Tcac09G0028760.1 Flavonoid IFS low borderline
Tcac09G0028770.1 Flavonoid IFS low borderline
Tcac09G0028770.2 Flavonoid IFS low borderline
Tcac09G0029540.1 Flavonoid IFS low borderline
Tcac09G0030250.1 Flavonoid IFS low borderline
Tcac09G0034140.1 Flavonoid IFS low borderline
Tcac10G0000010.1 Flavonoid IFS low borderline
Tcac10G0000010.2 Flavonoid IFS low borderline
Tcac10G0001970.1 Flavonoid IFS low borderline
Tcac10G0009530.1 Flavonoid IFS low borderline
Tcac10G0009610.1 Flavonoid IFS low borderline
Tcac10G0011250.1 Flavonoid IFS low borderline
Tcac10G0012610.1 Flavonoid IFS low borderline
Tcac10G0012610.2 Flavonoid IFS low borderline
Tcac10G0014120.1 Flavonoid IFS medium borderline
Tcac10G0016360.1 Flavonoid IFS medium borderline
Tcac10G0016420.1 Flavonoid IFS medium borderline
Tcac10G0016430.1 Flavonoid IFS low borderline
Tcac10G0017170.4 Flavonoid IFS low borderline
TcacsCAffold_780000550.1 Flavonoid IFS medium borderline