PlantSME Plant secondary metabolism enzyme database

Theobroma cacao (theobroma_cacao)

Imported from atlas release summary for Theobroma cacao.

2555
Candidate Protein Records
2109
Pathway-Level Records
5264
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 617 19 BAHD (254) View species results
Alkaloid pathway 471 22 7DLGT (91) View species results
Phenylpropanoid pathway 442 11 POD (197) View species results
Flavonoid pathway 246 9 UFGT (165) View species results
Rosmarinic acid pathway 193 7 C4H (70) View species results
Steroid pathway 140 13 CAS (70) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1997 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 419 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
Tcac09G0033200.1 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
Tcac09G0033210.1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
Tcac10G0002860.1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
Tcac10G0002870.1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
Tcac10G0002880.1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
Tcac10G0002900.1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
Tcac10G0002910.1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
Tcac10G0002920.1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
Tcac10G0002930.1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
Tcac10G0002940.1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
Tcac10G0002960.1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
Tcac10G0002970.1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
Tcac10G0015170.1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
Tcac10G0015210.1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH