PlantSME Plant secondary metabolism enzyme database

Fragaria mandshurica (fragaria_mandshurica)

Imported from atlas release summary for Fragaria mandshurica.

1321
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 18 BAHD (153) View species results
Alkaloid pathway 304 22 NMT (45) View species results
Phenylpropanoid pathway 284 11 POD (104) View species results
Flavonoid pathway 165 11 UFGT (101) View species results
Rosmarinic acid pathway 96 7 C4H (34) View species results
Steroid pathway 85 13 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
fragaria_mandshurica_evm.model.chr4.1213 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
fragaria_mandshurica_evm.model.chr4.1464 Terpenoid BAHD medium pass BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
fragaria_mandshurica_evm.model.chr4.1604 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
fragaria_mandshurica_evm.model.chr4.181 Terpenoid BAHD low borderline BAHD__00089__sp_Q9SB58_ZDH19_ARATH
fragaria_mandshurica_evm.model.chr4.1854 Terpenoid BAHD medium pass BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
fragaria_mandshurica_evm.model.chr4.1855 Terpenoid BAHD medium pass BAHD__00018__sp_I1MRZ6_DAT32_SOYBN
fragaria_mandshurica_evm.model.chr4.1913 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
fragaria_mandshurica_evm.model.chr4.1956 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
fragaria_mandshurica_evm.model.chr4.1997 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
fragaria_mandshurica_evm.model.chr4.2016 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
fragaria_mandshurica_evm.model.chr4.2196 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
fragaria_mandshurica_evm.model.chr4.226 Terpenoid BAHD medium pass BAHD__00022__sp_K7PEY4_RAM2_MEDTR
fragaria_mandshurica_evm.model.chr4.2535 Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
fragaria_mandshurica_evm.model.chr4.2687 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
fragaria_mandshurica_evm.model.chr4.2957 Terpenoid BAHD medium pass BAHD__00022__sp_K7PEY4_RAM2_MEDTR
fragaria_mandshurica_evm.model.chr4.2958 Terpenoid BAHD medium pass BAHD__00022__sp_K7PEY4_RAM2_MEDTR
fragaria_mandshurica_evm.model.chr4.3071 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
fragaria_mandshurica_evm.model.chr4.3094 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
fragaria_mandshurica_evm.model.chr4.591 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
fragaria_mandshurica_evm.model.chr4.604 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
fragaria_mandshurica_evm.model.chr4.721 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
fragaria_mandshurica_evm.model.chr4.722 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
fragaria_mandshurica_evm.model.chr4.940 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
fragaria_mandshurica_evm.model.chr4.941 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
fragaria_mandshurica_evm.model.chr4.942 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
fragaria_mandshurica_evm.model.chr5.152 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
fragaria_mandshurica_evm.model.chr5.2006 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
fragaria_mandshurica_evm.model.chr5.2009 Terpenoid BAHD low borderline BAHD__00087__sp_Q9M3B1_WSD6_ARATH
fragaria_mandshurica_evm.model.chr5.2099 Terpenoid BAHD medium pass BAHD__00034__sp_P10349_GPAT2_CUCMO
fragaria_mandshurica_evm.model.chr5.2204 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
fragaria_mandshurica_evm.model.chr5.2218 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
fragaria_mandshurica_evm.model.chr5.2233 Terpenoid BAHD low borderline BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
fragaria_mandshurica_evm.model.chr5.2247 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
fragaria_mandshurica_evm.model.chr5.2625 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
fragaria_mandshurica_evm.model.chr5.2626 Terpenoid BAHD low borderline BAHD__00074__sp_Q9FFQ7_FACT_ARATH
fragaria_mandshurica_evm.model.chr5.2787 Terpenoid BAHD low borderline BAHD__00024__sp_O23393_BIA1_ARATH
fragaria_mandshurica_evm.model.chr5.2937 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
fragaria_mandshurica_evm.model.chr5.3156 Terpenoid BAHD medium pass BAHD__00050__sp_Q6DR03_ZDHC3_ARATH
fragaria_mandshurica_evm.model.chr5.3338 Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
fragaria_mandshurica_evm.model.chr5.74 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
fragaria_mandshurica_evm.model.chr5.806 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
fragaria_mandshurica_evm.model.chr5.828 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
fragaria_mandshurica_evm.model.chr6.1153 Terpenoid BAHD medium pass BAHD__00027__sp_O80437_GPAT6_ARATH
fragaria_mandshurica_evm.model.chr6.1161 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
fragaria_mandshurica_evm.model.chr6.1438 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
fragaria_mandshurica_evm.model.chr6.1527 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
fragaria_mandshurica_evm.model.chr6.16 Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
fragaria_mandshurica_evm.model.chr6.1662 Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
fragaria_mandshurica_evm.model.chr6.2366 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
fragaria_mandshurica_evm.model.chr6.2587 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH