PlantSME Plant secondary metabolism enzyme database

Fragaria mandshurica (fragaria_mandshurica)

Imported from atlas release summary for Fragaria mandshurica.

1321
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 18 BAHD (153) View species results
Alkaloid pathway 304 22 NMT (45) View species results
Phenylpropanoid pathway 284 11 POD (104) View species results
Flavonoid pathway 165 11 UFGT (101) View species results
Rosmarinic acid pathway 96 7 C4H (34) View species results
Steroid pathway 85 13 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status Best Target
fragaria_mandshurica_evm.model.chr4.2324 Terpenoid CYP76 medium borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
fragaria_mandshurica_evm.model.chr4.2325 Terpenoid CYP76 low borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
fragaria_mandshurica_evm.model.chr4.2343 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
fragaria_mandshurica_evm.model.chr4.2360 Terpenoid CYP76 low borderline CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM
fragaria_mandshurica_evm.model.chr4.2361 Terpenoid CYP76 low borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
fragaria_mandshurica_evm.model.chr4.2462 Terpenoid CYP76 medium pass CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI
fragaria_mandshurica_evm.model.chr4.483 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
fragaria_mandshurica_evm.model.chr4.557 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
fragaria_mandshurica_evm.model.chr4.692 Terpenoid CYP76 medium pass CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
fragaria_mandshurica_evm.model.chr5.107 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
fragaria_mandshurica_evm.model.chr5.108 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
fragaria_mandshurica_evm.model.chr5.1189 Terpenoid CYP76 medium pass CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
fragaria_mandshurica_evm.model.chr5.1224 Terpenoid CYP76 medium pass CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
fragaria_mandshurica_evm.model.chr5.1263 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
fragaria_mandshurica_evm.model.chr5.1336 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
fragaria_mandshurica_evm.model.chr5.1368 Terpenoid CYP76 low borderline CYP76__00017__sp_Q14T82_C76B9_PETHY
fragaria_mandshurica_evm.model.chr5.1412 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
fragaria_mandshurica_evm.model.chr5.1705 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
fragaria_mandshurica_evm.model.chr5.1937 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
fragaria_mandshurica_evm.model.chr5.2516 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
fragaria_mandshurica_evm.model.chr5.256 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
fragaria_mandshurica_evm.model.chr5.2612 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
fragaria_mandshurica_evm.model.chr5.2613 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
fragaria_mandshurica_evm.model.chr5.2990 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
fragaria_mandshurica_evm.model.chr5.2991 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
fragaria_mandshurica_evm.model.chr5.53 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
fragaria_mandshurica_evm.model.chr5.58 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
fragaria_mandshurica_evm.model.chr5.676 Terpenoid CYP76 low borderline CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM
fragaria_mandshurica_evm.model.chr5.677 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
fragaria_mandshurica_evm.model.chr5.678 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
fragaria_mandshurica_evm.model.chr5.736 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
fragaria_mandshurica_evm.model.chr5.956 Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
fragaria_mandshurica_evm.model.chr6.1565 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
fragaria_mandshurica_evm.model.chr6.1575 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
fragaria_mandshurica_evm.model.chr6.1970 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
fragaria_mandshurica_evm.model.chr6.2403 Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
fragaria_mandshurica_evm.model.chr6.2619 Terpenoid CYP76 low borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
fragaria_mandshurica_evm.model.chr6.2858 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
fragaria_mandshurica_evm.model.chr6.3381 Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
fragaria_mandshurica_evm.model.chr6.3786 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
fragaria_mandshurica_evm.model.chr6.4604 Terpenoid CYP76 low borderline CYP76__00001__sp_A0A0C5Q4Y6_C76H2_ROSOF
fragaria_mandshurica_evm.model.chr6.725 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
fragaria_mandshurica_evm.model.chr6.897 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
fragaria_mandshurica_evm.model.chr7.1179 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
fragaria_mandshurica_evm.model.chr7.1187 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
fragaria_mandshurica_evm.model.chr7.1237 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
fragaria_mandshurica_evm.model.chr7.1650 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
fragaria_mandshurica_evm.model.chr7.405 Terpenoid CYP76 low borderline CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI
fragaria_mandshurica_evm.model.chr7.694 Terpenoid CYP76 medium pass CYP76__00006__sp_A0A1D8QMD1_C76K6_SALFT
fragaria_mandshurica_evm.model.chr7.742 Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU