PlantSME Plant secondary metabolism enzyme database

Fragaria mandshurica (fragaria_mandshurica)

Imported from atlas release summary for Fragaria mandshurica.

1321
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 18 BAHD (153) View species results
Alkaloid pathway 304 22 NMT (45) View species results
Phenylpropanoid pathway 284 11 POD (104) View species results
Flavonoid pathway 165 11 UFGT (101) View species results
Rosmarinic acid pathway 96 7 C4H (34) View species results
Steroid pathway 85 13 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
fragaria_mandshurica_evm.model.chr5.1077 Alkaloid T3O low borderline
fragaria_mandshurica_evm.model.chr5.1189 Alkaloid T3O medium borderline
fragaria_mandshurica_evm.model.chr5.1224 Alkaloid T3O medium borderline
fragaria_mandshurica_evm.model.chr5.1263 Alkaloid T3O medium borderline
fragaria_mandshurica_evm.model.chr5.1308 Alkaloid T3O low borderline
fragaria_mandshurica_evm.model.chr5.1368 Alkaloid T3O low borderline
fragaria_mandshurica_evm.model.chr5.1412 Alkaloid T3O medium borderline
fragaria_mandshurica_evm.model.chr5.160 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr5.161 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr5.162 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr5.165 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr5.167 Alkaloid T3O low borderline
fragaria_mandshurica_evm.model.chr5.1670 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr5.1937 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr5.2514 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr5.256 Alkaloid T3O medium borderline
fragaria_mandshurica_evm.model.chr5.2612 Alkaloid T3O medium borderline
fragaria_mandshurica_evm.model.chr5.2613 Alkaloid T3O medium borderline
fragaria_mandshurica_evm.model.chr5.2990 Alkaloid T3O medium borderline
fragaria_mandshurica_evm.model.chr5.3104 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr5.53 Alkaloid T3O medium borderline
fragaria_mandshurica_evm.model.chr5.677 Alkaloid T3O medium borderline
fragaria_mandshurica_evm.model.chr5.776 Alkaloid T3O low borderline
fragaria_mandshurica_evm.model.chr6.1255 Alkaloid T3O low borderline
fragaria_mandshurica_evm.model.chr6.2255 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr6.2858 Alkaloid T3O medium borderline
fragaria_mandshurica_evm.model.chr6.2909 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr6.3073 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr6.3381 Alkaloid T3O medium borderline
fragaria_mandshurica_evm.model.chr6.3610 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr6.4101 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr6.4122 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr6.4604 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr6.4692 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr7.1006 Alkaloid T3O low borderline
fragaria_mandshurica_evm.model.chr7.132 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr7.1819 Alkaloid T3O low borderline
fragaria_mandshurica_evm.model.chr7.1990 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr7.402 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr7.405 Alkaloid T3O medium pass
fragaria_mandshurica_evm.model.chr7.742 Alkaloid T3O medium borderline
fragaria_mandshurica_evm.model.chr7.842 Alkaloid T3O medium borderline