Fragaria mandshurica (fragaria_mandshurica)
Imported from atlas release summary for Fragaria mandshurica.
1321
Family-Level Assignments
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1321
Family-Level Assignments
BAHD
6.6%
C4H
5.73%
C3'H/CYP98A
4.9%
UGT
4.5%
4CL
4.1%
7DLGT
3.93%
POD
3.77%
UFGT
3.67%
Other Families
62.81%
More Families (96)
IFS
103
3.43%
CYP76
102
3.4%
T3O
92
3.07%
F3H
88
2.93%
NMT
84
2.8%
F3'H/CYP75B
55
1.83%
CAD
55
1.83%
STR
54
1.8%
H6H
52
1.73%
DWF4/CYP90B1
52
1.73%
CODM/T6ODM
49
1.63%
BR6OX2/CYP85A2
48
1.6%
LAC
47
1.57%
SMT1/SMT2/SMT3
45
1.5%
CSE
44
1.47%
GS
39
1.3%
TRI/TRII
38
1.27%
CAS
38
1.27%
IFR
32
1.07%
SGD
28
0.93%
CYP90D1
28
0.93%
IO
27
0.9%
ANR
27
0.9%
TPS
27
0.9%
COMT
25
0.83%
T16H
24
0.8%
GES
24
0.8%
HCT
24
0.8%
RAS
24
0.8%
CYP71
24
0.8%
PMT
23
0.77%
BR6OX1/CYP85A1
23
0.77%
PYKS
21
0.7%
G8O/G8H
20
0.67%
CCR
20
0.67%
7DLH
19
0.63%
F3'5'H/CYP75A
18
0.6%
LAMT
17
0.57%
F5H/CYP84A
16
0.53%
PAL
15
0.5%
TAT
15
0.5%
COR
14
0.47%
NCS
13
0.43%
SLS
13
0.43%
CPD/CYP90A1
12
0.4%
FNS
11
0.37%
CCoAOMT
11
0.37%
MPO
10
0.33%
16OMT
10
0.33%
DFR
10
0.33%
SQE
10
0.33%
ISY
9
0.3%
8HGO
9
0.3%
ANS/LDOX
9
0.3%
FPPS
9
0.3%
ROT3/CYP90C1
8
0.27%
CNMT
7
0.23%
CHS
7
0.23%
DET2
6
0.2%
CYP51G1
6
0.2%
GGPPS
6
0.2%
AACT
6
0.2%
HMGR
6
0.2%
BBE
5
0.17%
HPPR
5
0.17%
SQS/FDFT1
5
0.17%
6OMT_4OMT_SOMT
4
0.13%
CYP719
4
0.13%
CPR
4
0.13%
TDC
3
0.1%
TYDC_DDC
3
0.1%
ADC
3
0.1%
SMO1/SMO2
3
0.1%
DXS
3
0.1%
MVK
3
0.1%
DXR
3
0.1%
PMK
3
0.1%
IDI
3
0.1%
MVD
3
0.1%
CYP80B1
2
0.07%
CHI
2
0.07%
DWF1
2
0.07%
ODC
1
0.03%
CYP80F1
1
0.03%
FLS
1
0.03%
DWF7
1
0.03%
HYD1
1
0.03%
CPI1
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
HDR/IspH
1
0.03%
MCT/IspD
1
0.03%
HDS/IspG
1
0.03%
CMK/IspE
1
0.03%
HMGS
1
0.03%
MDS/IspF
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Family-Level Assignments | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 387 | 18 | BAHD (153) | View species results |
| Alkaloid pathway | 304 | 22 | NMT (45) | View species results |
| Phenylpropanoid pathway | 284 | 11 | POD (104) | View species results |
| Flavonoid pathway | 165 | 11 | UFGT (101) | View species results |
| Rosmarinic acid pathway | 96 | 7 | C4H (34) | View species results |
| Steroid pathway | 85 | 13 | CAS (30) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Family-level assignments | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1016 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 246 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| fragaria_mandshurica_evm.model.chr3.2590 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| fragaria_mandshurica_evm.model.chr3.2591 | Terpenoid | UGT | medium | pass | UGT__00098__sp_Q9LTH2_U76E2_ARATH |
| fragaria_mandshurica_evm.model.chr3.2593 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| fragaria_mandshurica_evm.model.chr3.3216 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| fragaria_mandshurica_evm.model.chr3.629 | Terpenoid | UGT | medium | pass | UGT__00009__sp_A0A0G4DBR5_FG3N_SOYBN |
| fragaria_mandshurica_evm.model.chr3.709 | Terpenoid | UGT | medium | pass | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| fragaria_mandshurica_evm.model.chr3.777 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| fragaria_mandshurica_evm.model.chr3.779 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| fragaria_mandshurica_evm.model.chr3.893 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| fragaria_mandshurica_evm.model.chr3.894 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| fragaria_mandshurica_evm.model.chr3.918 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| fragaria_mandshurica_evm.model.chr3.973 | Terpenoid | UGT | medium | pass | UGT__00028__sp_D3UAG1_U7A16_PYRCO |
| fragaria_mandshurica_evm.model.chr4.1074 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| fragaria_mandshurica_evm.model.chr4.1178 | Terpenoid | UGT | medium | pass | UGT__00021__sp_A7MAS5_75L17_MALDO |
| fragaria_mandshurica_evm.model.chr4.1179 | Terpenoid | UGT | medium | pass | UGT__00021__sp_A7MAS5_75L17_MALDO |
| fragaria_mandshurica_evm.model.chr4.2414 | Terpenoid | UGT | medium | pass | UGT__00102__sp_Q9LZD8_U89A2_ARATH |
| fragaria_mandshurica_evm.model.chr4.2415 | Terpenoid | UGT | medium | pass | UGT__00102__sp_Q9LZD8_U89A2_ARATH |
| fragaria_mandshurica_evm.model.chr4.249 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| fragaria_mandshurica_evm.model.chr4.250 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| fragaria_mandshurica_evm.model.chr4.346 | Terpenoid | UGT | medium | pass | UGT__00014__sp_A0A172J2G3_UGT43_PUEML |
| fragaria_mandshurica_evm.model.chr4.348 | Terpenoid | UGT | medium | pass | UGT__00104__sp_Q9S9P6_U78D1_ARATH |
| fragaria_mandshurica_evm.model.chr4.658 | Terpenoid | UGT | medium | pass | UGT__00015__sp_A0A193AU77_GGT24_PUNGR |
| fragaria_mandshurica_evm.model.chr4.659 | Terpenoid | UGT | medium | pass | UGT__00015__sp_A0A193AU77_GGT24_PUNGR |
| fragaria_mandshurica_evm.model.chr4.994 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| fragaria_mandshurica_evm.model.chr5.1259 | Terpenoid | UGT | medium | pass | UGT__00009__sp_A0A0G4DBR5_FG3N_SOYBN |
| fragaria_mandshurica_evm.model.chr5.1269 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| fragaria_mandshurica_evm.model.chr5.1271 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| fragaria_mandshurica_evm.model.chr5.1488 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| fragaria_mandshurica_evm.model.chr5.2071 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| fragaria_mandshurica_evm.model.chr5.2089 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| fragaria_mandshurica_evm.model.chr5.2100 | Terpenoid | UGT | medium | pass | UGT__00009__sp_A0A0G4DBR5_FG3N_SOYBN |
| fragaria_mandshurica_evm.model.chr5.2164 | Terpenoid | UGT | low | borderline | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| fragaria_mandshurica_evm.model.chr5.2165 | Terpenoid | UGT | low | borderline | UGT__00078__sp_Q8W491_U73B3_ARATH |
| fragaria_mandshurica_evm.model.chr5.2167 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| fragaria_mandshurica_evm.model.chr5.2326 | Terpenoid | UGT | medium | pass | UGT__00030__sp_D3UAG3_U88F2_PYRCO |
| fragaria_mandshurica_evm.model.chr5.2327 | Terpenoid | UGT | medium | pass | UGT__00030__sp_D3UAG3_U88F2_PYRCO |
| fragaria_mandshurica_evm.model.chr5.465 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| fragaria_mandshurica_evm.model.chr6.1211 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| fragaria_mandshurica_evm.model.chr6.1212 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| fragaria_mandshurica_evm.model.chr6.1310 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| fragaria_mandshurica_evm.model.chr6.1312 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| fragaria_mandshurica_evm.model.chr6.1371 | Terpenoid | UGT | medium | pass | UGT__00019__sp_A0A2R4LMF9_73C25_BARVU |
| fragaria_mandshurica_evm.model.chr6.2434 | Terpenoid | UGT | low | borderline | UGT__00078__sp_Q8W491_U73B3_ARATH |
| fragaria_mandshurica_evm.model.chr6.314 | Terpenoid | UGT | medium | pass | UGT__00009__sp_A0A0G4DBR5_FG3N_SOYBN |
| fragaria_mandshurica_evm.model.chr6.315 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| fragaria_mandshurica_evm.model.chr6.317 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| fragaria_mandshurica_evm.model.chr6.3527 | Terpenoid | UGT | medium | pass | UGT__00029__sp_D3UAG2_U71K2_PYRCO |
| fragaria_mandshurica_evm.model.chr6.3528 | Terpenoid | UGT | medium | pass | UGT__00061__sp_P0DO49_U71K3_FRAAN |
| fragaria_mandshurica_evm.model.chr6.3529 | Terpenoid | UGT | medium | pass | UGT__00028__sp_D3UAG1_U7A16_PYRCO |
| fragaria_mandshurica_evm.model.chr6.3531 | Terpenoid | UGT | medium | pass | UGT__00028__sp_D3UAG1_U7A16_PYRCO |