PlantSME Plant secondary metabolism enzyme database

Fragaria mandshurica (fragaria_mandshurica)

Imported from atlas release summary for Fragaria mandshurica.

1321
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 18 BAHD (153) View species results
Alkaloid pathway 304 22 NMT (45) View species results
Phenylpropanoid pathway 284 11 POD (104) View species results
Flavonoid pathway 165 11 UFGT (101) View species results
Rosmarinic acid pathway 96 7 C4H (34) View species results
Steroid pathway 85 13 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Gene Pathway Family Confidence Status Best Target
fragaria_mandshurica_evm.model.chr6.3535 Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
fragaria_mandshurica_evm.model.chr6.3536 Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
fragaria_mandshurica_evm.model.chr6.3537 Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
fragaria_mandshurica_evm.model.chr6.3538 Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
fragaria_mandshurica_evm.model.chr6.3560 Terpenoid UGT low borderline UGT__00105__sp_Q9SK82_U85A1_ARATH
fragaria_mandshurica_evm.model.chr6.3587 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
fragaria_mandshurica_evm.model.chr6.4157 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
fragaria_mandshurica_evm.model.chr6.4158 Terpenoid UGT low borderline UGT__00099__sp_Q9LTH3_U76E1_ARATH
fragaria_mandshurica_evm.model.chr6.4159 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
fragaria_mandshurica_evm.model.chr6.4223 Terpenoid UGT medium pass UGT__00006__sp_A0A0A1HA03_708C1_FAGES
fragaria_mandshurica_evm.model.chr6.4224 Terpenoid UGT medium pass UGT__00006__sp_A0A0A1HA03_708C1_FAGES
fragaria_mandshurica_evm.model.chr6.4225 Terpenoid UGT medium pass UGT__00018__sp_A0A224AM54_708G1_CITJP
fragaria_mandshurica_evm.model.chr6.4229 Terpenoid UGT medium pass UGT__00017__sp_A0A224AKZ9_708G2_CITUN
fragaria_mandshurica_evm.model.chr6.4421 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
fragaria_mandshurica_evm.model.chr6.4492 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
fragaria_mandshurica_evm.model.chr7.1145 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
fragaria_mandshurica_evm.model.chr7.1146 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
fragaria_mandshurica_evm.model.chr7.1147 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
fragaria_mandshurica_evm.model.chr7.1661 Terpenoid UGT medium pass UGT__00021__sp_A7MAS5_75L17_MALDO
fragaria_mandshurica_evm.model.chr7.1698 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
fragaria_mandshurica_evm.model.chr7.1735 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
fragaria_mandshurica_evm.model.chr7.1736 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
fragaria_mandshurica_evm.model.chr7.1737 Terpenoid UGT medium pass UGT__00085__sp_Q9FIA0_U76C2_ARATH
fragaria_mandshurica_evm.model.chr7.1738 Terpenoid UGT medium pass UGT__00085__sp_Q9FIA0_U76C2_ARATH
fragaria_mandshurica_evm.model.chr7.1739 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
fragaria_mandshurica_evm.model.chr7.1740 Terpenoid UGT medium pass UGT__00084__sp_Q9FI99_U76C1_ARATH
fragaria_mandshurica_evm.model.chr7.1785 Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
fragaria_mandshurica_evm.model.chr7.2073 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
fragaria_mandshurica_evm.model.chr7.2074 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
fragaria_mandshurica_evm.model.chr7.2076 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
fragaria_mandshurica_evm.model.chr7.2560 Terpenoid UGT medium pass UGT__00013__sp_A0A172J2D0_UGT2_PUEML
fragaria_mandshurica_evm.model.chr7.2561 Terpenoid UGT medium pass UGT__00001__sp_A0A067YB04_UGT1_PUEML
fragaria_mandshurica_evm.model.chr7.2562 Terpenoid UGT medium pass UGT__00013__sp_A0A172J2D0_UGT2_PUEML
fragaria_mandshurica_evm.model.chr7.2809 Terpenoid UGT medium pass UGT__00086__sp_Q9LFJ8_U78D2_ARATH
fragaria_mandshurica_evm.model.chr7.455 Terpenoid UGT low borderline UGT__00049__sp_O22820_U74F1_ARATH