PlantSME Plant secondary metabolism enzyme database

Fragaria mandshurica (fragaria_mandshurica)

Imported from atlas release summary for Fragaria mandshurica.

1550
Candidate Protein Records
1321
Pathway-Level Records
3001
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 18 BAHD (153) View species results
Alkaloid pathway 304 22 NMT (45) View species results
Phenylpropanoid pathway 284 11 POD (104) View species results
Flavonoid pathway 165 11 UFGT (101) View species results
Rosmarinic acid pathway 96 7 C4H (34) View species results
Steroid pathway 85 13 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
fragaria_mandshurica_evm.model.chr6.3531 Flavonoid UFGT high pass
fragaria_mandshurica_evm.model.chr6.3535 Flavonoid UFGT high pass
fragaria_mandshurica_evm.model.chr6.3536 Flavonoid UFGT medium pass
fragaria_mandshurica_evm.model.chr6.3537 Flavonoid UFGT medium pass
fragaria_mandshurica_evm.model.chr6.3538 Flavonoid UFGT medium pass
fragaria_mandshurica_evm.model.chr6.3560 Flavonoid UFGT high pass
fragaria_mandshurica_evm.model.chr6.3587 Flavonoid UFGT high pass
fragaria_mandshurica_evm.model.chr6.419 Flavonoid UFGT low borderline
fragaria_mandshurica_evm.model.chr6.4223 Flavonoid UFGT high pass
fragaria_mandshurica_evm.model.chr6.4224 Flavonoid UFGT high pass
fragaria_mandshurica_evm.model.chr6.4225 Flavonoid UFGT medium pass
fragaria_mandshurica_evm.model.chr6.4229 Flavonoid UFGT medium pass
fragaria_mandshurica_evm.model.chr6.4421 Flavonoid UFGT high pass
fragaria_mandshurica_evm.model.chr6.4492 Flavonoid UFGT high pass
fragaria_mandshurica_evm.model.chr7.1145 Flavonoid UFGT high pass
fragaria_mandshurica_evm.model.chr7.1147 Flavonoid UFGT medium pass
fragaria_mandshurica_evm.model.chr7.1698 Flavonoid UFGT medium pass
fragaria_mandshurica_evm.model.chr7.1735 Flavonoid UFGT medium pass
fragaria_mandshurica_evm.model.chr7.1736 Flavonoid UFGT high pass
fragaria_mandshurica_evm.model.chr7.1737 Flavonoid UFGT medium pass
fragaria_mandshurica_evm.model.chr7.1785 Flavonoid UFGT high pass
fragaria_mandshurica_evm.model.chr7.2073 Flavonoid UFGT low borderline
fragaria_mandshurica_evm.model.chr7.2074 Flavonoid UFGT low borderline
fragaria_mandshurica_evm.model.chr7.2076 Flavonoid UFGT low borderline
fragaria_mandshurica_evm.model.chr7.2809 Flavonoid UFGT medium pass