PlantSME Plant secondary metabolism enzyme database

Fragaria mandshurica (fragaria_mandshurica)

Imported from atlas release summary for Fragaria mandshurica.

1321
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 18 BAHD (153) View species results
Alkaloid pathway 304 22 NMT (45) View species results
Phenylpropanoid pathway 284 11 POD (104) View species results
Flavonoid pathway 165 11 UFGT (101) View species results
Rosmarinic acid pathway 96 7 C4H (34) View species results
Steroid pathway 85 13 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
fragaria_mandshurica_evm.model.chr3.2032 Flavonoid ANR medium borderline
fragaria_mandshurica_evm.model.chr3.257 Flavonoid ANR medium borderline
fragaria_mandshurica_evm.model.chr3.2960 Flavonoid ANR medium borderline
fragaria_mandshurica_evm.model.chr3.3251 Flavonoid ANR medium borderline
fragaria_mandshurica_evm.model.chr5.2407 Flavonoid ANR low borderline
fragaria_mandshurica_evm.model.chr5.2687 Flavonoid ANR high pass
fragaria_mandshurica_evm.model.chr5.3176 Flavonoid ANR medium borderline
fragaria_mandshurica_evm.model.chr5.3297 Flavonoid ANR medium borderline
fragaria_mandshurica_evm.model.chr6.1457 Flavonoid ANR medium borderline
fragaria_mandshurica_evm.model.chr6.4451 Flavonoid ANR low borderline
fragaria_mandshurica_evm.model.chr6.4520 Flavonoid ANR low borderline
fragaria_mandshurica_evm.model.chr6.78 Flavonoid ANR low borderline
fragaria_mandshurica_evm.model.chr7.1148 Flavonoid ANR medium borderline
fragaria_mandshurica_evm.model.chr7.1149 Flavonoid ANR medium borderline
fragaria_mandshurica_evm.model.chr7.849 Flavonoid ANR medium pass
fragaria_mandshurica_evm.model.chr7.850 Flavonoid ANR medium borderline
fragaria_mandshurica_evm.model.chr7.851 Flavonoid ANR medium borderline
fragaria_mandshurica_evm.model.chr7.852 Flavonoid ANR medium borderline
fragaria_mandshurica_evm.model.chr1.2159 Flavonoid ANS/LDOX medium pass
fragaria_mandshurica_evm.model.chr1.508 Flavonoid ANS/LDOX low borderline
fragaria_mandshurica_evm.model.chr1.768 Flavonoid ANS/LDOX medium borderline
fragaria_mandshurica_evm.model.chr2.111 Flavonoid ANS/LDOX medium borderline
fragaria_mandshurica_evm.model.chr2.2913 Flavonoid ANS/LDOX medium borderline
fragaria_mandshurica_evm.model.chr3.1346 Flavonoid ANS/LDOX medium borderline
fragaria_mandshurica_evm.model.chr3.1487 Flavonoid ANS/LDOX medium borderline
fragaria_mandshurica_evm.model.chr3.1610 Flavonoid ANS/LDOX low borderline
fragaria_mandshurica_evm.model.chr4.3048 Flavonoid ANS/LDOX medium pass
fragaria_mandshurica_evm.model.chr3.2470 Flavonoid C4H medium borderline
fragaria_mandshurica_evm.model.chr3.3192 Flavonoid C4H medium borderline
fragaria_mandshurica_evm.model.chr4.556 Flavonoid C4H medium pass
fragaria_mandshurica_evm.model.chr7.1990 Flavonoid C4H low borderline
fragaria_mandshurica_evm.model.chr7.694 Flavonoid C4H medium borderline
fragaria_mandshurica_evm.model.chr7.742 Flavonoid C4H medium borderline
fragaria_mandshurica_evm.model.chr7.1553 Flavonoid CHI medium pass
fragaria_mandshurica_evm.model.chr7.1989 Flavonoid CHI medium pass
fragaria_mandshurica_evm.model.chr0.167 Flavonoid CHS medium pass
fragaria_mandshurica_evm.model.chr0.81 Flavonoid CHS medium pass
fragaria_mandshurica_evm.model.chr0.82 Flavonoid CHS medium pass
fragaria_mandshurica_evm.model.chr2.2313 Flavonoid CHS medium pass
fragaria_mandshurica_evm.model.chr2.2314 Flavonoid CHS medium pass
fragaria_mandshurica_evm.model.chr4.374 Flavonoid CHS medium pass
fragaria_mandshurica_evm.model.chr7.265 Flavonoid CHS medium pass
fragaria_mandshurica_evm.model.chr2.155 Flavonoid DFR low borderline
fragaria_mandshurica_evm.model.chr2.3368 Flavonoid DFR medium borderline
fragaria_mandshurica_evm.model.chr2.622 Flavonoid DFR medium borderline
fragaria_mandshurica_evm.model.chr5.105 Flavonoid DFR medium borderline
fragaria_mandshurica_evm.model.chr5.2008 Flavonoid DFR medium borderline
fragaria_mandshurica_evm.model.chr5.3177 Flavonoid DFR medium borderline
fragaria_mandshurica_evm.model.chr5.3184 Flavonoid DFR medium borderline
fragaria_mandshurica_evm.model.chr5.3185 Flavonoid DFR low borderline