PlantSME Plant secondary metabolism enzyme database

Fragaria mandshurica (fragaria_mandshurica)

Imported from atlas release summary for Fragaria mandshurica.

1321
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 18 BAHD (153) View species results
Alkaloid pathway 304 22 NMT (45) View species results
Phenylpropanoid pathway 284 11 POD (104) View species results
Flavonoid pathway 165 11 UFGT (101) View species results
Rosmarinic acid pathway 96 7 C4H (34) View species results
Steroid pathway 85 13 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
fragaria_mandshurica_evm.model.chr1.1336 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr1.1489 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr1.1677 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr1.1679 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr1.2466 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr1.2467 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr1.2700 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr1.482 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr1.908 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr1.909 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr2.1181 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr2.1265 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr2.1266 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr2.1726 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr2.1727 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr2.1758 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr2.2600 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr2.2602 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr2.2768 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr2.2771 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr2.2777 Phenylpropanoid C3'H/CYP98A high pass
fragaria_mandshurica_evm.model.chr2.2779 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr2.2854 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr2.3016 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr2.3362 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr2.3482 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr2.356 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr2.675 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr2.873 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.1021 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.1022 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.1301 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr3.1392_evm.model.chr3.1393 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.1394 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.1396 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.2228 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr3.2337 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr3.2568 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.2659 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.2747 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.2755 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.2832 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.2916 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr3.2932 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr3.3183 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.3192 Phenylpropanoid C3'H/CYP98A medium borderline
fragaria_mandshurica_evm.model.chr3.3349 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.3356 Phenylpropanoid C3'H/CYP98A low borderline
fragaria_mandshurica_evm.model.chr3.858 Phenylpropanoid C3'H/CYP98A medium pass
fragaria_mandshurica_evm.model.chr4.111 Phenylpropanoid C3'H/CYP98A low borderline