PlantSME Plant secondary metabolism enzyme database

Fragaria mandshurica (fragaria_mandshurica)

Imported from atlas release summary for Fragaria mandshurica.

1550
Candidate Protein Records
1321
Pathway-Level Records
3001
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 18 BAHD (153) View species results
Alkaloid pathway 304 22 NMT (45) View species results
Phenylpropanoid pathway 284 11 POD (104) View species results
Flavonoid pathway 165 11 UFGT (101) View species results
Rosmarinic acid pathway 96 7 C4H (34) View species results
Steroid pathway 85 13 CAS (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
fragaria_mandshurica_evm.model.chr7.888 Terpenoid BAHD medium pass
fragaria_mandshurica_evm.model.chr7.889 Terpenoid BAHD medium pass
fragaria_mandshurica_evm.model.chr7.890 Terpenoid BAHD low borderline
fragaria_mandshurica_evm.model.chr7.891 Terpenoid BAHD low borderline
fragaria_mandshurica_evm.model.chr3.2119 Terpenoid CMK/IspE high pass
fragaria_mandshurica_evm.model.chr0.1210 Terpenoid CYP71 low borderline
fragaria_mandshurica_evm.model.chr0.1288 Terpenoid CYP71 medium borderline
fragaria_mandshurica_evm.model.chr1.1613 Terpenoid CYP71 low borderline
fragaria_mandshurica_evm.model.chr1.1786 Terpenoid CYP71 low borderline
fragaria_mandshurica_evm.model.chr1.2221 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr2.1773 Terpenoid CYP71 low borderline
fragaria_mandshurica_evm.model.chr2.2583 Terpenoid CYP71 low borderline
fragaria_mandshurica_evm.model.chr2.525 Terpenoid CYP71 low borderline
fragaria_mandshurica_evm.model.chr2.679 Terpenoid CYP71 low borderline
fragaria_mandshurica_evm.model.chr3.1301 Terpenoid CYP71 medium borderline
fragaria_mandshurica_evm.model.chr3.2688 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr3.2763 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr3.3325 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr4.1696 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr4.1993 Terpenoid CYP71 medium borderline
fragaria_mandshurica_evm.model.chr4.2238 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr4.391 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr4.424 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr4.72 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr6.191 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr6.2058 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr6.2404 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr7.1826 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr7.821 Terpenoid CYP71 medium pass
fragaria_mandshurica_evm.model.chr0.1122 Terpenoid CYP76 low borderline
fragaria_mandshurica_evm.model.chr0.1211 Terpenoid CYP76 low borderline
fragaria_mandshurica_evm.model.chr0.215 Terpenoid CYP76 medium borderline
fragaria_mandshurica_evm.model.chr0.216 Terpenoid CYP76 low borderline
fragaria_mandshurica_evm.model.chr0.40 Terpenoid CYP76 low borderline
fragaria_mandshurica_evm.model.chr0.407 Terpenoid CYP76 medium pass
fragaria_mandshurica_evm.model.chr0.41 Terpenoid CYP76 medium borderline
fragaria_mandshurica_evm.model.chr1.1677 Terpenoid CYP76 medium pass
fragaria_mandshurica_evm.model.chr1.1679 Terpenoid CYP76 medium pass
fragaria_mandshurica_evm.model.chr1.2145 Terpenoid CYP76 low borderline
fragaria_mandshurica_evm.model.chr1.2466 Terpenoid CYP76 medium pass
fragaria_mandshurica_evm.model.chr1.2467 Terpenoid CYP76 medium pass
fragaria_mandshurica_evm.model.chr1.2674 Terpenoid CYP76 low borderline
fragaria_mandshurica_evm.model.chr1.908 Terpenoid CYP76 medium borderline
fragaria_mandshurica_evm.model.chr1.909 Terpenoid CYP76 medium borderline
fragaria_mandshurica_evm.model.chr2.1265 Terpenoid CYP76 medium pass
fragaria_mandshurica_evm.model.chr2.1266 Terpenoid CYP76 medium pass
fragaria_mandshurica_evm.model.chr2.2600 Terpenoid CYP76 low borderline
fragaria_mandshurica_evm.model.chr2.2602 Terpenoid CYP76 low borderline
fragaria_mandshurica_evm.model.chr2.2768 Terpenoid CYP76 medium borderline
fragaria_mandshurica_evm.model.chr2.2771 Terpenoid CYP76 medium pass