PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
Garb01G0004460 Steroid BR6OX2/CYP85A2 low borderline
Garb01G0008160 Steroid BR6OX2/CYP85A2 low borderline
Garb01G0013450 Steroid BR6OX2/CYP85A2 low borderline
Garb01G0015850 Steroid BR6OX2/CYP85A2 low borderline
Garb01G0015890 Steroid BR6OX2/CYP85A2 low borderline
Garb01G0017770 Steroid BR6OX2/CYP85A2 low borderline
Garb01G0020030 Steroid BR6OX2/CYP85A2 low borderline
Garb01G0022290 Steroid BR6OX2/CYP85A2 low borderline
Garb01G0031060 Steroid BR6OX2/CYP85A2 low borderline
Garb01G0035020 Steroid BR6OX2/CYP85A2 low borderline
Garb01G0035180 Steroid BR6OX2/CYP85A2 low borderline
Garb02G0001010 Steroid BR6OX2/CYP85A2 low borderline
Garb02G0012100 Steroid BR6OX2/CYP85A2 low borderline
Garb03G0000770 Steroid BR6OX2/CYP85A2 low borderline
Garb03G0004600 Steroid BR6OX2/CYP85A2 low borderline
Garb03G0007680 Steroid BR6OX2/CYP85A2 low borderline
Garb03G0027810 Steroid BR6OX2/CYP85A2 low borderline
Garb04G0002610 Steroid BR6OX2/CYP85A2 low borderline
Garb04G0004970 Steroid BR6OX2/CYP85A2 low borderline
Garb04G0013640 Steroid BR6OX2/CYP85A2 low borderline
Garb04G0019720 Steroid BR6OX2/CYP85A2 low borderline
Garb04G0024910 Steroid BR6OX2/CYP85A2 low borderline
Garb04G0025350 Steroid BR6OX2/CYP85A2 low borderline
Garb05G0004590 Steroid BR6OX2/CYP85A2 low borderline
Garb05G0006440 Steroid BR6OX2/CYP85A2 low borderline
Garb05G0007130 Steroid BR6OX2/CYP85A2 low borderline
Garb05G0009350 Steroid BR6OX2/CYP85A2 low borderline
Garb05G0010130 Steroid BR6OX2/CYP85A2 low borderline
Garb05G0010420 Steroid BR6OX2/CYP85A2 low borderline
Garb05G0012000 Steroid BR6OX2/CYP85A2 low borderline
Garb05G0012030 Steroid BR6OX2/CYP85A2 low borderline
Garb05G0012040 Steroid BR6OX2/CYP85A2 low borderline
Garb05G0012050 Steroid BR6OX2/CYP85A2 low borderline
Garb05G0012080 Steroid BR6OX2/CYP85A2 low borderline
Garb05G0016160 Steroid BR6OX2/CYP85A2 low borderline
Garb05G0016190 Steroid BR6OX2/CYP85A2 low borderline
Garb06G0000240 Steroid BR6OX2/CYP85A2 medium borderline
Garb06G0002780 Steroid BR6OX2/CYP85A2 low borderline
Garb06G0011710 Steroid BR6OX2/CYP85A2 low borderline
Garb06G0013730 Steroid BR6OX2/CYP85A2 low borderline
Garb06G0016740 Steroid BR6OX2/CYP85A2 low borderline
Garb06G0018810 Steroid BR6OX2/CYP85A2 low borderline
Garb06G0028600 Steroid BR6OX2/CYP85A2 low borderline
Garb06G0033110 Steroid BR6OX2/CYP85A2 low borderline
Garb07G0006350 Steroid BR6OX2/CYP85A2 low borderline
Garb07G0011720 Steroid BR6OX2/CYP85A2 low borderline
Garb07G0011740 Steroid BR6OX2/CYP85A2 low borderline
Garb07G0011760 Steroid BR6OX2/CYP85A2 low borderline
Garb07G0016890 Steroid BR6OX2/CYP85A2 low borderline
Garb07G0024970 Steroid BR6OX2/CYP85A2 low borderline