PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Protein/Isoform Record Pathway Family Confidence Status
Garb03G0026850 Phenylpropanoid C3'H/CYP98A low borderline
Garb04G0002610 Phenylpropanoid C3'H/CYP98A low borderline
Garb04G0004970 Phenylpropanoid C3'H/CYP98A low borderline
Garb04G0007000 Phenylpropanoid C3'H/CYP98A medium borderline
Garb04G0008710 Phenylpropanoid C3'H/CYP98A low borderline
Garb04G0009230 Phenylpropanoid C3'H/CYP98A medium pass
Garb04G0012240 Phenylpropanoid C3'H/CYP98A medium borderline
Garb04G0013000 Phenylpropanoid C3'H/CYP98A low borderline
Garb04G0017880 Phenylpropanoid C3'H/CYP98A low borderline
Garb04G0019720 Phenylpropanoid C3'H/CYP98A medium borderline
Garb04G0020150 Phenylpropanoid C3'H/CYP98A low borderline
Garb04G0020160 Phenylpropanoid C3'H/CYP98A low borderline
Garb04G0022370 Phenylpropanoid C3'H/CYP98A medium borderline
Garb04G0022500 Phenylpropanoid C3'H/CYP98A low borderline
Garb04G0022920 Phenylpropanoid C3'H/CYP98A low borderline
Garb04G0024910 Phenylpropanoid C3'H/CYP98A medium borderline
Garb04G0025350 Phenylpropanoid C3'H/CYP98A medium borderline
Garb04G0030180 Phenylpropanoid C3'H/CYP98A medium borderline
Garb04G0030190 Phenylpropanoid C3'H/CYP98A medium borderline
Garb04G0030200 Phenylpropanoid C3'H/CYP98A medium borderline
Garb04G0031890 Phenylpropanoid C3'H/CYP98A low borderline
Garb04G0031960 Phenylpropanoid C3'H/CYP98A medium borderline
Garb04G0031980 Phenylpropanoid C3'H/CYP98A medium borderline
Garb05G0000860 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0004590 Phenylpropanoid C3'H/CYP98A medium borderline
Garb05G0006440 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0007130 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0008500 Phenylpropanoid C3'H/CYP98A medium borderline
Garb05G0009350 Phenylpropanoid C3'H/CYP98A medium borderline
Garb05G0010130 Phenylpropanoid C3'H/CYP98A medium borderline
Garb05G0010170 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0010420 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0012000 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0012040 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0012050 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0012070 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0012080 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0012090 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0012110 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0016010 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0016130 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0016170 Phenylpropanoid C3'H/CYP98A low borderline
Garb05G0017840 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0000220 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0000230 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0000240 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0000880 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0001330 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0002420 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0005730 Phenylpropanoid C3'H/CYP98A medium borderline