PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Protein/Isoform Record Pathway Family Confidence Status
Garb11G0016750 Phenylpropanoid C3'H/CYP98A medium borderline
Garb11G0016760 Phenylpropanoid C3'H/CYP98A medium borderline
Garb11G0018250 Phenylpropanoid C3'H/CYP98A low borderline
Garb11G0018870 Phenylpropanoid C3'H/CYP98A low borderline
Garb11G0019100 Phenylpropanoid C3'H/CYP98A medium borderline
Garb11G0021190 Phenylpropanoid C3'H/CYP98A low borderline
Garb11G0021680 Phenylpropanoid C3'H/CYP98A medium borderline
Garb11G0021700 Phenylpropanoid C3'H/CYP98A medium borderline
Garb11G0024410 Phenylpropanoid C3'H/CYP98A medium borderline
Garb11G0024430 Phenylpropanoid C3'H/CYP98A medium borderline
Garb11G0025570 Phenylpropanoid C3'H/CYP98A low borderline
Garb12G0000130 Phenylpropanoid C3'H/CYP98A low borderline
Garb12G0006130 Phenylpropanoid C3'H/CYP98A medium pass
Garb12G0009410 Phenylpropanoid C3'H/CYP98A low borderline
Garb12G0014580 Phenylpropanoid C3'H/CYP98A low borderline
Garb12G0015340 Phenylpropanoid C3'H/CYP98A low borderline
Garb12G0017310 Phenylpropanoid C3'H/CYP98A low borderline
Garb12G0020300 Phenylpropanoid C3'H/CYP98A low borderline
Garb12G0024660 Phenylpropanoid C3'H/CYP98A low borderline
Garb12G0024760 Phenylpropanoid C3'H/CYP98A low borderline
Garb12G0024770 Phenylpropanoid C3'H/CYP98A low borderline
Garb12G0024780 Phenylpropanoid C3'H/CYP98A low borderline
Garb12G0026610 Phenylpropanoid C3'H/CYP98A low borderline
Garb12G0026660 Phenylpropanoid C3'H/CYP98A medium borderline
Garb12G0026670 Phenylpropanoid C3'H/CYP98A medium borderline
Garb12G0027800 Phenylpropanoid C3'H/CYP98A medium borderline
Garb12G0029910 Phenylpropanoid C3'H/CYP98A low borderline
Garb12G0031160 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0001300 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0002170 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0002860 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0004010 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0004830 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0004890 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0004900 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0004920 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0010830 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0011030 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0011050 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0011090 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0011590 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0011710 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0012240 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0012670 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0012870 Phenylpropanoid C3'H/CYP98A low borderline
Garb13G0014480 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0016570 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0016580 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0016600 Phenylpropanoid C3'H/CYP98A medium borderline
Garb13G0016630 Phenylpropanoid C3'H/CYP98A medium borderline