PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Garb07G0031770 Rosmarinic Acid C4H low borderline
Garb07G0031780 Rosmarinic Acid C4H low borderline
Garb07G0033180 Rosmarinic Acid C4H low borderline
Garb08G0001970 Rosmarinic Acid C4H low borderline
Garb08G0002200 Rosmarinic Acid C4H medium pass
Garb08G0002210 Rosmarinic Acid C4H low borderline
Garb08G0002220 Rosmarinic Acid C4H low borderline
Garb08G0002230 Rosmarinic Acid C4H medium pass
Garb08G0002240 Rosmarinic Acid C4H low borderline
Garb08G0002250 Rosmarinic Acid C4H medium pass
Garb08G0002480 Rosmarinic Acid C4H low borderline
Garb08G0002490 Rosmarinic Acid C4H low borderline
Garb08G0004980 Rosmarinic Acid C4H low borderline
Garb08G0006050 Rosmarinic Acid C4H medium pass
Garb08G0008010 Rosmarinic Acid C4H low borderline
Garb08G0015660 Rosmarinic Acid C4H low borderline
Garb08G0015890 Rosmarinic Acid C4H low borderline
Garb08G0015900 Rosmarinic Acid C4H low borderline
Garb08G0015910 Rosmarinic Acid C4H medium pass
Garb08G0016370 Rosmarinic Acid C4H low borderline
Garb08G0016670 Rosmarinic Acid C4H low borderline
Garb08G0023380 Rosmarinic Acid C4H medium pass
Garb08G0027210 Rosmarinic Acid C4H low borderline
Garb08G0027860 Rosmarinic Acid C4H low borderline
Garb09G0000080 Rosmarinic Acid C4H low borderline
Garb09G0000100 Rosmarinic Acid C4H low borderline
Garb09G0000110 Rosmarinic Acid C4H low borderline
Garb09G0000120 Rosmarinic Acid C4H low borderline
Garb09G0000130 Rosmarinic Acid C4H low borderline
Garb09G0000140 Rosmarinic Acid C4H low borderline
Garb09G0000150 Rosmarinic Acid C4H low borderline
Garb09G0000800 Rosmarinic Acid C4H medium pass
Garb09G0003210 Rosmarinic Acid C4H low borderline
Garb09G0003220 Rosmarinic Acid C4H low borderline
Garb09G0003240 Rosmarinic Acid C4H medium pass
Garb09G0003250 Rosmarinic Acid C4H medium pass
Garb09G0003260 Rosmarinic Acid C4H low borderline
Garb09G0004270 Rosmarinic Acid C4H medium pass
Garb09G0016230 Rosmarinic Acid C4H medium pass
Garb09G0016240 Rosmarinic Acid C4H low borderline
Garb09G0017600 Rosmarinic Acid C4H low borderline
Garb09G0018300 Rosmarinic Acid C4H low borderline
Garb09G0018450 Rosmarinic Acid C4H low borderline
Garb09G0019280 Rosmarinic Acid C4H medium pass
Garb09G0020440 Rosmarinic Acid C4H low borderline
Garb09G0022660 Rosmarinic Acid C4H low borderline
Garb10G0001490 Rosmarinic Acid C4H medium pass
Garb10G0001740 Rosmarinic Acid C4H low borderline
Garb10G0005220 Rosmarinic Acid C4H low borderline
Garb10G0005730 Rosmarinic Acid C4H low borderline