PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
Garb09G0005190 Alkaloid CODM/T6ODM medium borderline
Garb09G0005200 Alkaloid CODM/T6ODM medium pass
Garb09G0005210 Alkaloid CODM/T6ODM medium borderline
Garb09G0005220 Alkaloid CODM/T6ODM medium borderline
Garb09G0014110 Alkaloid CODM/T6ODM medium borderline
Garb09G0014120 Alkaloid CODM/T6ODM medium borderline
Garb09G0018720 Alkaloid CODM/T6ODM medium borderline
Garb09G0020130 Alkaloid CODM/T6ODM medium borderline
Garb09G0023010 Alkaloid CODM/T6ODM medium borderline
Garb09G0025690 Alkaloid CODM/T6ODM medium borderline
Garb10G0008800 Alkaloid CODM/T6ODM medium borderline
Garb10G0024300 Alkaloid CODM/T6ODM medium borderline
Garb10G0025800 Alkaloid CODM/T6ODM medium borderline
Garb10G0027140 Alkaloid CODM/T6ODM medium borderline
Garb11G0000480 Alkaloid CODM/T6ODM medium borderline
Garb11G0010230 Alkaloid CODM/T6ODM medium borderline
Garb11G0012850 Alkaloid CODM/T6ODM medium borderline
Garb11G0012860 Alkaloid CODM/T6ODM medium borderline
Garb11G0012870 Alkaloid CODM/T6ODM medium borderline
Garb11G0012880 Alkaloid CODM/T6ODM medium borderline
Garb11G0012890 Alkaloid CODM/T6ODM medium borderline
Garb11G0012900 Alkaloid CODM/T6ODM medium borderline
Garb11G0022720 Alkaloid CODM/T6ODM medium borderline
Garb11G0022730 Alkaloid CODM/T6ODM low borderline
Garb11G0022740 Alkaloid CODM/T6ODM medium borderline
Garb11G0022760 Alkaloid CODM/T6ODM medium borderline
Garb11G0022790 Alkaloid CODM/T6ODM medium borderline
Garb11G0022800 Alkaloid CODM/T6ODM medium borderline
Garb11G0027580 Alkaloid CODM/T6ODM medium borderline
Garb11G0030230 Alkaloid CODM/T6ODM medium borderline
Garb11G0032850 Alkaloid CODM/T6ODM low borderline
Garb12G0004330 Alkaloid CODM/T6ODM medium borderline
Garb12G0011740 Alkaloid CODM/T6ODM medium borderline
Garb12G0014100 Alkaloid CODM/T6ODM medium borderline
Garb13G0001050 Alkaloid CODM/T6ODM medium borderline
Garb13G0001390 Alkaloid CODM/T6ODM medium borderline
Garb13G0003320 Alkaloid CODM/T6ODM medium borderline
Garb13G0004960 Alkaloid CODM/T6ODM medium borderline
Garb13G0004970 Alkaloid CODM/T6ODM medium borderline
Garb13G0010030 Alkaloid CODM/T6ODM medium borderline
Garb13G0010110 Alkaloid CODM/T6ODM medium borderline
Garb13G0010120 Alkaloid CODM/T6ODM medium borderline
Garb13G0010270 Alkaloid CODM/T6ODM medium borderline
Garb13G0010280 Alkaloid CODM/T6ODM medium borderline
Garb13G0012570 Alkaloid CODM/T6ODM medium borderline
Garb13G0013890 Alkaloid CODM/T6ODM medium borderline
Garb13G0016280 Alkaloid CODM/T6ODM medium borderline
Garb13G0021300 Alkaloid CODM/T6ODM medium borderline
Garb13G0021310 Alkaloid CODM/T6ODM medium borderline
Garb13G0032790 Alkaloid CODM/T6ODM medium borderline