PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
Reset
Gene Pathway Family Confidence Status Best Target
Garb01G0009860 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb01G0012670 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Garb01G0031300 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb02G0006370 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Garb02G0007160 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Garb04G0006600 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Garb04G0019740 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb04G0028910 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb04G0032910 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb05G0001740 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb05G0015580 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb06G0003590 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb06G0005760 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb06G0010330 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb06G0017210 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb06G0030350 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0000730 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0002070 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Garb07G0015130 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0020130 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0020140 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0020150 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0020160 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0020170 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0020180 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0020190 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0020230 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0020750 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb07G0027670 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Garb08G0006230 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb08G0019480 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Garb08G0023160 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb09G0014050 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb09G0014060 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb10G0005550 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb10G0007430 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb10G0007440 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb10G0034210 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb11G0023880 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010460 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010480 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010490 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010500 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010530 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010540 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0010550 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0013840 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb12G0021460 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Garb12G0029170 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Garb13G0011810 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL