PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Garb05G0007000 Flavonoid F3H medium borderline
Garb05G0009030 Flavonoid F3H low borderline
Garb05G0009170 Flavonoid F3H low borderline
Garb05G0012430 Flavonoid F3H medium borderline
Garb05G0012440 Flavonoid F3H medium borderline
Garb05G0012470 Flavonoid F3H medium borderline
Garb05G0012600 Flavonoid F3H medium borderline
Garb05G0012610 Flavonoid F3H medium borderline
Garb05G0012620 Flavonoid F3H medium borderline
Garb05G0012630 Flavonoid F3H low borderline
Garb05G0013450 Flavonoid F3H medium borderline
Garb05G0016540 Flavonoid F3H medium borderline
Garb06G0007600 Flavonoid F3H low borderline
Garb06G0013470 Flavonoid F3H medium borderline
Garb06G0013480 Flavonoid F3H medium borderline
Garb06G0013490 Flavonoid F3H medium borderline
Garb06G0013520 Flavonoid F3H medium borderline
Garb06G0013530 Flavonoid F3H medium borderline
Garb06G0013550 Flavonoid F3H medium borderline
Garb06G0013560 Flavonoid F3H medium borderline
Garb06G0021230 Flavonoid F3H medium borderline
Garb06G0030200 Flavonoid F3H low borderline
Garb06G0030210 Flavonoid F3H low borderline
Garb06G0031470 Flavonoid F3H medium borderline
Garb07G0001700 Flavonoid F3H medium borderline
Garb07G0001710 Flavonoid F3H medium borderline
Garb07G0001720 Flavonoid F3H medium borderline
Garb07G0001740 Flavonoid F3H medium borderline
Garb07G0001760 Flavonoid F3H medium borderline
Garb07G0001780 Flavonoid F3H medium borderline
Garb07G0005870 Flavonoid F3H medium borderline
Garb07G0010890 Flavonoid F3H medium borderline
Garb07G0010900 Flavonoid F3H medium borderline
Garb07G0011210 Flavonoid F3H medium borderline
Garb07G0012000 Flavonoid F3H medium pass
Garb07G0020800 Flavonoid F3H medium borderline
Garb07G0024650 Flavonoid F3H medium borderline
Garb07G0025550 Flavonoid F3H medium borderline
Garb07G0026300 Flavonoid F3H medium borderline
Garb07G0026310 Flavonoid F3H medium borderline
Garb07G0029050 Flavonoid F3H medium borderline
Garb08G0000650 Flavonoid F3H low borderline
Garb08G0001840 Flavonoid F3H medium borderline
Garb08G0011510 Flavonoid F3H medium borderline
Garb08G0021480 Flavonoid F3H medium borderline
Garb09G0002900 Flavonoid F3H low borderline
Garb09G0004940 Flavonoid F3H medium borderline
Garb09G0004950 Flavonoid F3H medium borderline
Garb09G0005190 Flavonoid F3H low borderline
Garb09G0005210 Flavonoid F3H medium borderline