PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
Reset
Gene Pathway Family Confidence Status
Garb12G0000920 Flavonoid F3H low borderline
Garb12G0004320 Flavonoid F3H medium borderline
Garb12G0004330 Flavonoid F3H medium borderline
Garb12G0011740 Flavonoid F3H medium borderline
Garb12G0014100 Flavonoid F3H medium borderline
Garb12G0017510 Flavonoid F3H medium borderline
Garb12G0029800 Flavonoid F3H medium borderline
Garb12G0029810 Flavonoid F3H medium borderline
Garb12G0029820 Flavonoid F3H medium borderline
Garb12G0030910 Flavonoid F3H medium borderline
Garb12G0030930 Flavonoid F3H medium borderline
Garb13G0001050 Flavonoid F3H medium borderline
Garb13G0001390 Flavonoid F3H medium borderline
Garb13G0003320 Flavonoid F3H medium borderline
Garb13G0004960 Flavonoid F3H medium borderline
Garb13G0004970 Flavonoid F3H medium borderline
Garb13G0010030 Flavonoid F3H medium borderline
Garb13G0010110 Flavonoid F3H medium borderline
Garb13G0010270 Flavonoid F3H medium borderline
Garb13G0010280 Flavonoid F3H medium borderline
Garb13G0012570 Flavonoid F3H medium borderline
Garb13G0013890 Flavonoid F3H medium borderline
Garb13G0016280 Flavonoid F3H medium borderline
Garb13G0018660 Flavonoid F3H low borderline
Garb13G0018670 Flavonoid F3H medium borderline
Garb13G0019510 Flavonoid F3H low borderline
Garb13G0021300 Flavonoid F3H medium borderline
Garb13G0021310 Flavonoid F3H medium borderline
Garb13G0032780 Flavonoid F3H medium borderline
Garb13G0032790 Flavonoid F3H medium borderline
Garb13G0032800 Flavonoid F3H medium borderline