PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Protein/Isoform Record Pathway Family Confidence Status
Garb01G0003300 Flavonoid F3'H/CYP75B low borderline
Garb01G0017770 Flavonoid F3'H/CYP75B low borderline
Garb01G0031040 Flavonoid F3'H/CYP75B low borderline
Garb01G0031060 Flavonoid F3'H/CYP75B medium borderline
Garb01G0034500 Flavonoid F3'H/CYP75B low borderline
Garb01G0035180 Flavonoid F3'H/CYP75B low borderline
Garb02G0001010 Flavonoid F3'H/CYP75B medium borderline
Garb02G0003770 Flavonoid F3'H/CYP75B medium borderline
Garb02G0007300 Flavonoid F3'H/CYP75B medium borderline
Garb03G0000770 Flavonoid F3'H/CYP75B low borderline
Garb03G0004600 Flavonoid F3'H/CYP75B medium borderline
Garb04G0007040 Flavonoid F3'H/CYP75B medium borderline
Garb04G0008710 Flavonoid F3'H/CYP75B low borderline
Garb04G0012240 Flavonoid F3'H/CYP75B medium borderline
Garb04G0017880 Flavonoid F3'H/CYP75B low borderline
Garb04G0030200 Flavonoid F3'H/CYP75B medium borderline
Garb04G0031890 Flavonoid F3'H/CYP75B low borderline
Garb04G0031980 Flavonoid F3'H/CYP75B medium borderline
Garb05G0004590 Flavonoid F3'H/CYP75B medium borderline
Garb05G0006440 Flavonoid F3'H/CYP75B low borderline
Garb05G0007130 Flavonoid F3'H/CYP75B medium borderline
Garb05G0009350 Flavonoid F3'H/CYP75B medium borderline
Garb05G0010130 Flavonoid F3'H/CYP75B medium borderline
Garb05G0016170 Flavonoid F3'H/CYP75B low borderline
Garb06G0002420 Flavonoid F3'H/CYP75B low borderline
Garb06G0011710 Flavonoid F3'H/CYP75B medium borderline
Garb06G0016740 Flavonoid F3'H/CYP75B medium borderline
Garb06G0017450 Flavonoid F3'H/CYP75B low borderline
Garb06G0017470 Flavonoid F3'H/CYP75B medium borderline
Garb06G0018810 Flavonoid F3'H/CYP75B medium borderline
Garb06G0020570 Flavonoid F3'H/CYP75B medium borderline
Garb06G0025190 Flavonoid F3'H/CYP75B low borderline
Garb06G0025650 Flavonoid F3'H/CYP75B low borderline
Garb06G0029000 Flavonoid F3'H/CYP75B medium borderline
Garb06G0030720 Flavonoid F3'H/CYP75B medium borderline
Garb06G0033110 Flavonoid F3'H/CYP75B medium borderline
Garb06G0033120 Flavonoid F3'H/CYP75B low borderline
Garb06G0033130 Flavonoid F3'H/CYP75B medium borderline
Garb06G0033920 Flavonoid F3'H/CYP75B low borderline
Garb07G0006260 Flavonoid F3'H/CYP75B medium borderline
Garb07G0006290 Flavonoid F3'H/CYP75B medium borderline
Garb07G0006350 Flavonoid F3'H/CYP75B medium borderline
Garb07G0006380 Flavonoid F3'H/CYP75B medium borderline
Garb07G0007080 Flavonoid F3'H/CYP75B medium borderline
Garb07G0011720 Flavonoid F3'H/CYP75B medium borderline
Garb07G0011730 Flavonoid F3'H/CYP75B medium borderline
Garb07G0011740 Flavonoid F3'H/CYP75B medium borderline
Garb07G0011750 Flavonoid F3'H/CYP75B medium borderline
Garb07G0024980 Flavonoid F3'H/CYP75B medium borderline
Garb07G0026510 Flavonoid F3'H/CYP75B low borderline