PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Protein/Isoform Record Pathway Family Confidence Status
Garb07G0026520 Flavonoid F3'H/CYP75B low borderline
Garb07G0026530 Flavonoid F3'H/CYP75B low borderline
Garb07G0026780 Flavonoid F3'H/CYP75B medium borderline
Garb07G0031710 Flavonoid F3'H/CYP75B medium borderline
Garb07G0031740 Flavonoid F3'H/CYP75B medium borderline
Garb07G0033180 Flavonoid F3'H/CYP75B medium borderline
Garb08G0004980 Flavonoid F3'H/CYP75B low borderline
Garb08G0015890 Flavonoid F3'H/CYP75B medium borderline
Garb08G0015910 Flavonoid F3'H/CYP75B medium borderline
Garb09G0000110 Flavonoid F3'H/CYP75B medium borderline
Garb09G0000150 Flavonoid F3'H/CYP75B medium borderline
Garb09G0003260 Flavonoid F3'H/CYP75B medium borderline
Garb10G0014520 Flavonoid F3'H/CYP75B medium borderline
Garb10G0014550 Flavonoid F3'H/CYP75B medium borderline
Garb10G0014580 Flavonoid F3'H/CYP75B medium borderline
Garb10G0017430 Flavonoid F3'H/CYP75B medium borderline
Garb10G0024670 Flavonoid F3'H/CYP75B low borderline
Garb10G0027050 Flavonoid F3'H/CYP75B medium borderline
Garb10G0036500 Flavonoid F3'H/CYP75B medium borderline
Garb10G0036510 Flavonoid F3'H/CYP75B medium borderline
Garb10G0038730 Flavonoid F3'H/CYP75B medium borderline
Garb11G0000840 Flavonoid F3'H/CYP75B medium borderline
Garb11G0001450 Flavonoid F3'H/CYP75B medium borderline
Garb11G0016740 Flavonoid F3'H/CYP75B medium borderline
Garb11G0016750 Flavonoid F3'H/CYP75B medium borderline
Garb11G0016760 Flavonoid F3'H/CYP75B medium borderline
Garb11G0018250 Flavonoid F3'H/CYP75B low borderline
Garb11G0018870 Flavonoid F3'H/CYP75B low borderline
Garb11G0019100 Flavonoid F3'H/CYP75B medium borderline
Garb11G0021680 Flavonoid F3'H/CYP75B medium pass
Garb11G0030990 Flavonoid F3'H/CYP75B low borderline
Garb12G0006130 Flavonoid F3'H/CYP75B medium borderline
Garb12G0015340 Flavonoid F3'H/CYP75B low borderline
Garb12G0020300 Flavonoid F3'H/CYP75B low borderline
Garb12G0027800 Flavonoid F3'H/CYP75B medium borderline
Garb12G0029910 Flavonoid F3'H/CYP75B low borderline
Garb12G0031160 Flavonoid F3'H/CYP75B low borderline
Garb13G0002170 Flavonoid F3'H/CYP75B medium borderline
Garb13G0004920 Flavonoid F3'H/CYP75B medium borderline
Garb13G0010980 Flavonoid F3'H/CYP75B low borderline
Garb13G0011060 Flavonoid F3'H/CYP75B low borderline
Garb13G0013810 Flavonoid F3'H/CYP75B medium borderline
Garb13G0016620 Flavonoid F3'H/CYP75B medium borderline
Garb13G0017280 Flavonoid F3'H/CYP75B low borderline
Garb13G0019170 Flavonoid F3'H/CYP75B medium borderline
Garb13G0020290 Flavonoid F3'H/CYP75B low borderline
Garb13G0025740 Flavonoid F3'H/CYP75B low borderline
Garb13G0029680 Flavonoid F3'H/CYP75B medium borderline