PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Garb09G0025700 Alkaloid H6H low borderline
Garb09G0025710 Alkaloid H6H low borderline
Garb09G0025720 Alkaloid H6H low borderline
Garb10G0008200 Alkaloid H6H medium borderline
Garb10G0018550 Alkaloid H6H low borderline
Garb10G0020550 Alkaloid H6H medium pass
Garb10G0025090 Alkaloid H6H low borderline
Garb10G0025810 Alkaloid H6H low borderline
Garb10G0037800 Alkaloid H6H low borderline
Garb10G0037820 Alkaloid H6H low borderline
Garb10G0037830 Alkaloid H6H low borderline
Garb10G0037850 Alkaloid H6H low borderline
Garb10G0037880 Alkaloid H6H low borderline
Garb10G0037890 Alkaloid H6H low borderline
Garb10G0037900 Alkaloid H6H medium borderline
Garb10G0037920 Alkaloid H6H low borderline
Garb11G0000620 Alkaloid H6H low borderline
Garb11G0000630 Alkaloid H6H low borderline
Garb11G0000640 Alkaloid H6H low borderline
Garb11G0000650 Alkaloid H6H low borderline
Garb11G0005170 Alkaloid H6H medium borderline
Garb11G0022780 Alkaloid H6H low borderline
Garb11G0023050 Alkaloid H6H low borderline
Garb11G0031140 Alkaloid H6H medium borderline
Garb11G0031160 Alkaloid H6H medium borderline
Garb11G0033390 Alkaloid H6H medium pass
Garb12G0001120 Alkaloid H6H low borderline
Garb12G0004320 Alkaloid H6H medium borderline
Garb12G0017510 Alkaloid H6H medium pass
Garb12G0030910 Alkaloid H6H medium borderline
Garb12G0030930 Alkaloid H6H medium borderline
Garb13G0017430 Alkaloid H6H low borderline
Garb13G0018660 Alkaloid H6H low borderline
Garb13G0018670 Alkaloid H6H low borderline
Garb13G0032780 Alkaloid H6H medium borderline