PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
Garb05G0010420 Flavonoid IFS low borderline
Garb05G0012000 Flavonoid IFS low borderline
Garb05G0012040 Flavonoid IFS low borderline
Garb05G0012050 Flavonoid IFS low borderline
Garb05G0012080 Flavonoid IFS low borderline
Garb05G0012090 Flavonoid IFS low borderline
Garb05G0012110 Flavonoid IFS low borderline
Garb05G0016010 Flavonoid IFS low borderline
Garb05G0016130 Flavonoid IFS low borderline
Garb05G0016140 Flavonoid IFS low borderline
Garb06G0000220 Flavonoid IFS medium borderline
Garb06G0000230 Flavonoid IFS medium borderline
Garb06G0000240 Flavonoid IFS medium borderline
Garb06G0000880 Flavonoid IFS low borderline
Garb06G0001330 Flavonoid IFS low borderline
Garb06G0005730 Flavonoid IFS medium borderline
Garb06G0007190 Flavonoid IFS low borderline
Garb06G0007980 Flavonoid IFS medium borderline
Garb06G0008480 Flavonoid IFS medium borderline
Garb06G0013720 Flavonoid IFS medium borderline
Garb06G0014420 Flavonoid IFS low borderline
Garb06G0018400 Flavonoid IFS low borderline
Garb06G0021640 Flavonoid IFS medium borderline
Garb06G0022110 Flavonoid IFS medium borderline
Garb06G0026500 Flavonoid IFS medium borderline
Garb06G0028600 Flavonoid IFS low borderline
Garb06G0030730 Flavonoid IFS low borderline
Garb07G0004100 Flavonoid IFS low borderline
Garb07G0006330 Flavonoid IFS medium borderline
Garb07G0006360 Flavonoid IFS medium borderline
Garb07G0006370 Flavonoid IFS medium borderline
Garb07G0006400 Flavonoid IFS medium borderline
Garb07G0006420 Flavonoid IFS medium borderline
Garb07G0008310 Flavonoid IFS low borderline
Garb07G0011760 Flavonoid IFS medium borderline
Garb07G0013610 Flavonoid IFS low borderline
Garb07G0014280 Flavonoid IFS medium borderline
Garb07G0014300 Flavonoid IFS medium borderline
Garb07G0014750 Flavonoid IFS low borderline
Garb07G0016000 Flavonoid IFS low borderline
Garb07G0016010 Flavonoid IFS low borderline
Garb07G0016020 Flavonoid IFS low borderline
Garb07G0016890 Flavonoid IFS low borderline
Garb07G0024970 Flavonoid IFS medium borderline
Garb07G0026480 Flavonoid IFS low borderline
Garb07G0026490 Flavonoid IFS low borderline
Garb07G0026500 Flavonoid IFS low borderline
Garb07G0028530 Flavonoid IFS low borderline
Garb07G0030820 Flavonoid IFS medium borderline
Garb07G0031030 Flavonoid IFS low borderline