PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
Reset
Gene Pathway Family Confidence Status
Garb07G0031700 Flavonoid IFS medium borderline
Garb07G0031720 Flavonoid IFS low borderline
Garb07G0031730 Flavonoid IFS medium borderline
Garb07G0031750 Flavonoid IFS medium borderline
Garb07G0031770 Flavonoid IFS low borderline
Garb07G0031780 Flavonoid IFS medium borderline
Garb08G0001970 Flavonoid IFS medium borderline
Garb08G0002220 Flavonoid IFS low borderline
Garb08G0002230 Flavonoid IFS medium borderline
Garb08G0002240 Flavonoid IFS low borderline
Garb08G0002250 Flavonoid IFS medium borderline
Garb08G0002480 Flavonoid IFS low borderline
Garb08G0002490 Flavonoid IFS low borderline
Garb08G0006050 Flavonoid IFS medium borderline
Garb08G0012430 Flavonoid IFS low borderline
Garb08G0015660 Flavonoid IFS low borderline
Garb08G0015900 Flavonoid IFS medium borderline
Garb08G0016370 Flavonoid IFS low borderline
Garb08G0023380 Flavonoid IFS medium borderline
Garb08G0027860 Flavonoid IFS low borderline
Garb09G0000080 Flavonoid IFS medium borderline
Garb09G0000100 Flavonoid IFS high pass
Garb09G0000120 Flavonoid IFS medium borderline
Garb09G0000130 Flavonoid IFS medium borderline
Garb09G0003210 Flavonoid IFS medium borderline
Garb09G0003220 Flavonoid IFS medium borderline
Garb09G0003240 Flavonoid IFS medium borderline
Garb09G0003250 Flavonoid IFS medium borderline
Garb09G0004270 Flavonoid IFS medium borderline
Garb09G0014730 Flavonoid IFS low borderline
Garb09G0016230 Flavonoid IFS medium borderline
Garb09G0016240 Flavonoid IFS medium borderline
Garb09G0016810 Flavonoid IFS low borderline
Garb09G0017600 Flavonoid IFS low borderline
Garb09G0017890 Flavonoid IFS low borderline
Garb09G0018450 Flavonoid IFS low borderline
Garb09G0019280 Flavonoid IFS medium borderline
Garb09G0020490 Flavonoid IFS low borderline
Garb10G0001490 Flavonoid IFS medium borderline
Garb10G0001740 Flavonoid IFS medium borderline
Garb10G0005220 Flavonoid IFS low borderline
Garb10G0005780 Flavonoid IFS medium borderline
Garb10G0012930 Flavonoid IFS medium borderline
Garb10G0018820 Flavonoid IFS low borderline
Garb10G0021110 Flavonoid IFS low borderline
Garb10G0021120 Flavonoid IFS low borderline
Garb10G0022730 Flavonoid IFS medium borderline
Garb10G0022740 Flavonoid IFS medium borderline
Garb10G0023040 Flavonoid IFS medium borderline
Garb10G0023110 Flavonoid IFS medium borderline