PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Protein/Isoform Record Pathway Family Confidence Status
Garb10G0023130 Flavonoid IFS medium borderline
Garb10G0023140 Flavonoid IFS medium borderline
Garb10G0026530 Flavonoid IFS low borderline
Garb10G0030680 Flavonoid IFS low borderline
Garb10G0032060 Flavonoid IFS low borderline
Garb10G0034810 Flavonoid IFS medium borderline
Garb10G0036100 Flavonoid IFS low borderline
Garb11G0000210 Flavonoid IFS low borderline
Garb11G0000350 Flavonoid IFS low borderline
Garb11G0000360 Flavonoid IFS low borderline
Garb11G0000760 Flavonoid IFS low borderline
Garb11G0001600 Flavonoid IFS medium borderline
Garb11G0001610 Flavonoid IFS medium borderline
Garb11G0003840 Flavonoid IFS low borderline
Garb11G0021190 Flavonoid IFS low borderline
Garb11G0021700 Flavonoid IFS medium borderline
Garb11G0024410 Flavonoid IFS medium borderline
Garb11G0024430 Flavonoid IFS medium borderline
Garb12G0008300 Flavonoid IFS medium borderline
Garb12G0009410 Flavonoid IFS low borderline
Garb12G0017310 Flavonoid IFS low borderline
Garb12G0024660 Flavonoid IFS low borderline
Garb12G0024760 Flavonoid IFS low borderline
Garb12G0024770 Flavonoid IFS low borderline
Garb12G0024780 Flavonoid IFS low borderline
Garb12G0026610 Flavonoid IFS low borderline
Garb12G0026670 Flavonoid IFS medium borderline
Garb13G0001300 Flavonoid IFS low borderline
Garb13G0002250 Flavonoid IFS medium borderline
Garb13G0002860 Flavonoid IFS low borderline
Garb13G0004010 Flavonoid IFS medium borderline
Garb13G0004900 Flavonoid IFS medium borderline
Garb13G0004930 Flavonoid IFS medium pass
Garb13G0010830 Flavonoid IFS low borderline
Garb13G0011050 Flavonoid IFS low borderline
Garb13G0011090 Flavonoid IFS low borderline
Garb13G0011590 Flavonoid IFS low borderline
Garb13G0011710 Flavonoid IFS medium borderline
Garb13G0012240 Flavonoid IFS low borderline
Garb13G0012670 Flavonoid IFS medium borderline
Garb13G0012870 Flavonoid IFS low borderline
Garb13G0014480 Flavonoid IFS medium borderline
Garb13G0016580 Flavonoid IFS medium borderline
Garb13G0016600 Flavonoid IFS medium borderline
Garb13G0016630 Flavonoid IFS medium borderline
Garb13G0017840 Flavonoid IFS low borderline
Garb13G0020360 Flavonoid IFS low borderline
Garb13G0022430 Flavonoid IFS medium borderline
Garb13G0022440 Flavonoid IFS medium borderline
Garb13G0025240 Flavonoid IFS low borderline