PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status
Garb08G0027440 Phenylpropanoid POD low borderline
Garb09G0000550 Phenylpropanoid POD medium pass
Garb09G0001610 Phenylpropanoid POD medium pass
Garb09G0002810 Phenylpropanoid POD medium pass
Garb09G0005890 Phenylpropanoid POD medium pass
Garb09G0008450 Phenylpropanoid POD medium pass
Garb09G0011980 Phenylpropanoid POD medium pass
Garb09G0011990 Phenylpropanoid POD medium pass
Garb09G0017740 Phenylpropanoid POD medium pass
Garb09G0020330 Phenylpropanoid POD medium pass
Garb09G0023660 Phenylpropanoid POD medium pass
Garb10G0000740 Phenylpropanoid POD medium pass
Garb10G0003260 Phenylpropanoid POD medium pass
Garb10G0007230 Phenylpropanoid POD medium pass
Garb10G0008330 Phenylpropanoid POD medium pass
Garb10G0008580 Phenylpropanoid POD medium pass
Garb10G0009550 Phenylpropanoid POD medium pass
Garb10G0011120 Phenylpropanoid POD medium pass
Garb10G0013920 Phenylpropanoid POD medium pass
Garb10G0013930 Phenylpropanoid POD medium pass
Garb10G0015800 Phenylpropanoid POD medium pass
Garb10G0015850 Phenylpropanoid POD medium pass
Garb10G0018320 Phenylpropanoid POD medium pass
Garb10G0021970 Phenylpropanoid POD medium pass
Garb10G0025500 Phenylpropanoid POD medium pass
Garb10G0026770 Phenylpropanoid POD medium pass
Garb10G0028580 Phenylpropanoid POD medium pass
Garb10G0029260 Phenylpropanoid POD medium pass
Garb10G0031570 Phenylpropanoid POD medium pass
Garb10G0031700 Phenylpropanoid POD medium pass
Garb10G0039460 Phenylpropanoid POD medium pass
Garb11G0001440 Phenylpropanoid POD low borderline
Garb11G0002010 Phenylpropanoid POD medium pass
Garb11G0002020 Phenylpropanoid POD low borderline
Garb11G0002030 Phenylpropanoid POD medium pass
Garb11G0012310 Phenylpropanoid POD low borderline
Garb11G0016160 Phenylpropanoid POD medium pass
Garb11G0017680 Phenylpropanoid POD medium pass
Garb11G0018140 Phenylpropanoid POD medium pass
Garb11G0019460 Phenylpropanoid POD medium pass
Garb11G0019660 Phenylpropanoid POD medium pass
Garb11G0022090 Phenylpropanoid POD medium pass
Garb11G0023790 Phenylpropanoid POD medium pass
Garb11G0023900 Phenylpropanoid POD medium pass
Garb11G0025350 Phenylpropanoid POD medium pass
Garb11G0025540 Phenylpropanoid POD medium pass
Garb11G0026200 Phenylpropanoid POD medium pass
Garb11G0029290 Phenylpropanoid POD medium pass
Garb11G0029900 Phenylpropanoid POD medium pass
Garb11G0034330 Phenylpropanoid POD medium pass