PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Garb08G0015900 Alkaloid T3O medium borderline
Garb08G0015910 Alkaloid T3O medium borderline
Garb08G0016370 Alkaloid T3O low borderline
Garb08G0027860 Alkaloid T3O low borderline
Garb09G0000080 Alkaloid T3O medium borderline
Garb09G0000120 Alkaloid T3O medium borderline
Garb09G0000130 Alkaloid T3O medium borderline
Garb09G0000140 Alkaloid T3O medium borderline
Garb09G0003220 Alkaloid T3O medium borderline
Garb09G0003240 Alkaloid T3O medium borderline
Garb09G0003250 Alkaloid T3O medium borderline
Garb09G0004270 Alkaloid T3O medium borderline
Garb09G0016230 Alkaloid T3O medium borderline
Garb09G0016240 Alkaloid T3O medium borderline
Garb09G0016810 Alkaloid T3O low borderline
Garb09G0017890 Alkaloid T3O low borderline
Garb09G0019280 Alkaloid T3O medium borderline
Garb09G0020490 Alkaloid T3O low borderline
Garb10G0001490 Alkaloid T3O medium borderline
Garb10G0001740 Alkaloid T3O medium borderline
Garb10G0005220 Alkaloid T3O medium pass
Garb10G0005730 Alkaloid T3O medium borderline
Garb10G0005780 Alkaloid T3O medium borderline
Garb10G0012930 Alkaloid T3O medium borderline
Garb10G0021110 Alkaloid T3O medium pass
Garb10G0021120 Alkaloid T3O medium pass
Garb10G0022730 Alkaloid T3O medium borderline
Garb10G0022740 Alkaloid T3O medium borderline
Garb10G0023110 Alkaloid T3O medium borderline
Garb10G0023130 Alkaloid T3O medium borderline
Garb10G0023140 Alkaloid T3O medium borderline
Garb10G0024670 Alkaloid T3O low borderline
Garb10G0026530 Alkaloid T3O low borderline
Garb10G0030680 Alkaloid T3O medium pass
Garb10G0036100 Alkaloid T3O medium pass
Garb10G0036500 Alkaloid T3O medium borderline
Garb10G0038730 Alkaloid T3O medium borderline
Garb11G0000230 Alkaloid T3O low borderline
Garb11G0000350 Alkaloid T3O low borderline
Garb11G0000360 Alkaloid T3O low borderline
Garb11G0000760 Alkaloid T3O medium pass
Garb11G0001600 Alkaloid T3O medium borderline
Garb11G0001610 Alkaloid T3O medium borderline
Garb11G0003840 Alkaloid T3O medium pass
Garb11G0016760 Alkaloid T3O medium borderline
Garb11G0018870 Alkaloid T3O low borderline
Garb11G0019100 Alkaloid T3O medium borderline
Garb11G0021700 Alkaloid T3O medium borderline
Garb11G0024410 Alkaloid T3O medium borderline
Garb11G0024430 Alkaloid T3O medium borderline