PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
Garb01G0005960 Flavonoid UFGT high pass
Garb01G0007050 Flavonoid UFGT high pass
Garb01G0010770 Flavonoid UFGT high pass
Garb01G0010790 Flavonoid UFGT medium pass
Garb01G0010800 Flavonoid UFGT medium pass
Garb01G0012490 Flavonoid UFGT high pass
Garb01G0020140 Flavonoid UFGT low borderline
Garb01G0020160 Flavonoid UFGT high pass
Garb01G0020170 Flavonoid UFGT medium pass
Garb01G0020230 Flavonoid UFGT high pass
Garb01G0020240 Flavonoid UFGT medium pass
Garb01G0026350 Flavonoid UFGT high pass
Garb01G0026360 Flavonoid UFGT medium pass
Garb01G0026370 Flavonoid UFGT medium pass
Garb01G0030270 Flavonoid UFGT medium pass
Garb01G0030290 Flavonoid UFGT medium pass
Garb01G0033070 Flavonoid UFGT medium pass
Garb02G0000150 Flavonoid UFGT low borderline
Garb02G0000220 Flavonoid UFGT medium pass
Garb02G0000230 Flavonoid UFGT medium pass
Garb02G0000250 Flavonoid UFGT medium pass
Garb02G0000260 Flavonoid UFGT medium pass
Garb02G0000270 Flavonoid UFGT medium pass
Garb02G0000930 Flavonoid UFGT high pass
Garb02G0003390 Flavonoid UFGT medium pass
Garb02G0015020 Flavonoid UFGT high pass
Garb02G0015830 Flavonoid UFGT high pass
Garb03G0002770 Flavonoid UFGT low borderline
Garb03G0011040 Flavonoid UFGT medium pass
Garb03G0023710 Flavonoid UFGT low borderline
Garb04G0001070 Flavonoid UFGT medium pass
Garb04G0001080 Flavonoid UFGT high pass
Garb04G0001100 Flavonoid UFGT high pass
Garb04G0009210 Flavonoid UFGT low borderline
Garb04G0009220 Flavonoid UFGT medium pass
Garb04G0009630 Flavonoid UFGT medium pass
Garb04G0012280 Flavonoid UFGT medium pass
Garb04G0012290 Flavonoid UFGT low borderline
Garb04G0012300 Flavonoid UFGT high pass
Garb04G0015700 Flavonoid UFGT medium pass
Garb04G0015710 Flavonoid UFGT high pass
Garb04G0023160 Flavonoid UFGT high pass
Garb04G0031880 Flavonoid UFGT medium pass
Garb05G0007520 Flavonoid UFGT medium pass
Garb05G0008310 Flavonoid UFGT medium pass
Garb05G0014560 Flavonoid UFGT high pass
Garb05G0014570 Flavonoid UFGT high pass
Garb05G0015430 Flavonoid UFGT medium pass
Garb05G0015440 Flavonoid UFGT medium pass
Garb05G0015450 Flavonoid UFGT medium pass