PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
Garb05G0017290 Flavonoid UFGT medium pass
Garb05G0017960 Flavonoid UFGT medium pass
Garb06G0003670 Flavonoid UFGT medium pass
Garb06G0003680 Flavonoid UFGT medium pass
Garb06G0004120 Flavonoid UFGT medium pass
Garb06G0004150 Flavonoid UFGT low borderline
Garb06G0004750 Flavonoid UFGT high pass
Garb06G0004760 Flavonoid UFGT high pass
Garb06G0009820 Flavonoid UFGT high pass
Garb06G0010040 Flavonoid UFGT medium pass
Garb06G0011450 Flavonoid UFGT high pass
Garb06G0012850 Flavonoid UFGT medium pass
Garb06G0015170 Flavonoid UFGT medium pass
Garb06G0015180 Flavonoid UFGT high pass
Garb06G0016940 Flavonoid UFGT medium pass
Garb06G0017220 Flavonoid UFGT medium pass
Garb06G0018960 Flavonoid UFGT high pass
Garb06G0019460 Flavonoid UFGT medium pass
Garb06G0023460 Flavonoid UFGT low borderline
Garb06G0025800 Flavonoid UFGT medium pass
Garb06G0026540 Flavonoid UFGT medium pass
Garb06G0026560 Flavonoid UFGT medium pass
Garb07G0000880 Flavonoid UFGT high pass
Garb07G0003150 Flavonoid UFGT high pass
Garb07G0003190 Flavonoid UFGT high pass
Garb07G0004960 Flavonoid UFGT medium pass
Garb07G0013690 Flavonoid UFGT high pass
Garb07G0015530 Flavonoid UFGT high pass
Garb07G0016980 Flavonoid UFGT medium pass
Garb07G0017000 Flavonoid UFGT medium pass
Garb07G0017020 Flavonoid UFGT high pass
Garb07G0021790 Flavonoid UFGT high pass
Garb07G0022320 Flavonoid UFGT medium pass
Garb07G0025560 Flavonoid UFGT high pass
Garb07G0028550 Flavonoid UFGT low borderline
Garb07G0028560 Flavonoid UFGT medium pass
Garb07G0028570 Flavonoid UFGT high pass
Garb07G0032820 Flavonoid UFGT high pass
Garb07G0032830 Flavonoid UFGT medium pass
Garb07G0032840 Flavonoid UFGT high pass
Garb07G0033280 Flavonoid UFGT medium pass
Garb07G0034540 Flavonoid UFGT medium pass
Garb08G0005240 Flavonoid UFGT high pass
Garb08G0005580 Flavonoid UFGT high pass
Garb08G0006270 Flavonoid UFGT medium pass
Garb08G0012530 Flavonoid UFGT medium pass
Garb08G0012610 Flavonoid UFGT medium pass
Garb08G0012620 Flavonoid UFGT high pass
Garb08G0012630 Flavonoid UFGT medium pass
Garb08G0013390 Flavonoid UFGT high pass