PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
Garb08G0013800 Flavonoid UFGT high pass
Garb08G0013810 Flavonoid UFGT medium pass
Garb08G0013820 Flavonoid UFGT medium pass
Garb08G0013830 Flavonoid UFGT medium pass
Garb08G0015670 Flavonoid UFGT high pass
Garb08G0018280 Flavonoid UFGT high pass
Garb08G0018290 Flavonoid UFGT medium pass
Garb08G0020910 Flavonoid UFGT high pass
Garb08G0021090 Flavonoid UFGT medium pass
Garb08G0023450 Flavonoid UFGT medium pass
Garb08G0023460 Flavonoid UFGT medium pass
Garb08G0023470 Flavonoid UFGT medium pass
Garb09G0001680 Flavonoid UFGT medium pass
Garb09G0012450 Flavonoid UFGT medium pass
Garb09G0012460 Flavonoid UFGT medium pass
Garb09G0018790 Flavonoid UFGT medium pass
Garb10G0000270 Flavonoid UFGT medium pass
Garb10G0001310 Flavonoid UFGT low borderline
Garb10G0023360 Flavonoid UFGT high pass
Garb10G0030470 Flavonoid UFGT medium pass
Garb10G0034560 Flavonoid UFGT high pass
Garb10G0034570 Flavonoid UFGT medium pass
Garb10G0034580 Flavonoid UFGT medium pass
Garb10G0034590 Flavonoid UFGT high pass
Garb10G0034600 Flavonoid UFGT high pass
Garb10G0034610 Flavonoid UFGT medium pass
Garb10G0034620 Flavonoid UFGT high pass
Garb11G0003400 Flavonoid UFGT high pass
Garb11G0007010 Flavonoid UFGT low borderline
Garb11G0013080 Flavonoid UFGT high pass
Garb11G0013090 Flavonoid UFGT medium pass
Garb11G0013110 Flavonoid UFGT medium pass
Garb11G0014140 Flavonoid UFGT medium pass
Garb11G0033710 Flavonoid UFGT medium pass
Garb12G0002610 Flavonoid UFGT high pass
Garb12G0004240 Flavonoid UFGT high pass
Garb12G0004260 Flavonoid UFGT high pass
Garb12G0004280 Flavonoid UFGT medium pass
Garb12G0005350 Flavonoid UFGT high pass
Garb12G0005370 Flavonoid UFGT high pass
Garb12G0010900 Flavonoid UFGT high pass
Garb12G0017750 Flavonoid UFGT medium pass
Garb12G0020610 Flavonoid UFGT high pass
Garb12G0020620 Flavonoid UFGT high pass
Garb12G0020630 Flavonoid UFGT high pass
Garb12G0022240 Flavonoid UFGT medium pass
Garb12G0026250 Flavonoid UFGT medium pass
Garb12G0026440 Flavonoid UFGT medium pass
Garb13G0001830 Flavonoid UFGT medium pass
Garb13G0002110 Flavonoid UFGT medium pass