PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Garb05G0017140 Alkaloid COR medium pass
Garb05G0017150 Alkaloid COR medium pass
Garb06G0015960 Alkaloid COR medium pass
Garb07G0000340 Alkaloid COR medium pass
Garb07G0000360 Alkaloid COR medium pass
Garb07G0020550 Alkaloid COR medium pass
Garb09G0022480 Alkaloid COR medium pass
Garb11G0026410 Alkaloid COR medium pass
Garb11G0026420 Alkaloid COR medium pass
Garb12G0017930 Alkaloid COR medium pass
Garb12G0017960 Alkaloid COR medium pass
Garb12G0017980 Alkaloid COR medium pass
Garb12G0017990 Alkaloid COR medium pass
Garb12G0018730 Alkaloid COR medium pass
Garb12G0027260 Alkaloid COR medium pass
Garb01G0006170 Alkaloid CYP719 low borderline
Garb02G0012640 Alkaloid CYP719 low borderline
Garb02G0015850 Alkaloid CYP719 medium borderline
Garb03G0026850 Alkaloid CYP719 medium borderline
Garb06G0017450 Alkaloid CYP719 low borderline
Garb08G0002240 Alkaloid CYP719 medium borderline
Garb08G0008010 Alkaloid CYP719 medium borderline
Garb08G0027210 Alkaloid CYP719 medium borderline
Garb09G0020440 Alkaloid CYP719 medium borderline
Garb11G0003870 Alkaloid CYP719 medium borderline
Garb12G0026630 Alkaloid CYP719 medium borderline
Garb13G0020360 Alkaloid CYP719 medium borderline
Garb01G0015890 Alkaloid CYP80B1 medium borderline
Garb02G0007790 Alkaloid CYP80B1 medium borderline
Garb06G0013730 Alkaloid CYP80B1 medium borderline
Garb07G0011760 Alkaloid CYP80B1 medium borderline
Garb07G0031720 Alkaloid CYP80B1 low borderline
Garb09G0022640 Alkaloid CYP80B1 medium borderline
Garb10G0014520 Alkaloid CYP80B1 medium borderline
Garb10G0014580 Alkaloid CYP80B1 medium borderline
Garb11G0016740 Alkaloid CYP80B1 medium borderline
Garb11G0016750 Alkaloid CYP80B1 medium borderline
Garb05G0002950 Alkaloid CYP80F1 low borderline
Garb13G0031350 Alkaloid CYP80F1 low borderline
Garb01G0011350 Alkaloid G8O/G8H medium borderline
Garb01G0015860 Alkaloid G8O/G8H medium borderline
Garb01G0017310 Alkaloid G8O/G8H medium borderline
Garb01G0017320 Alkaloid G8O/G8H medium borderline
Garb01G0031050 Alkaloid G8O/G8H low borderline
Garb02G0007300 Alkaloid G8O/G8H medium borderline
Garb02G0009130 Alkaloid G8O/G8H medium borderline
Garb03G0003180 Alkaloid G8O/G8H medium borderline
Garb03G0004280 Alkaloid G8O/G8H medium borderline
Garb03G0004310 Alkaloid G8O/G8H medium pass
Garb03G0004600 Alkaloid G8O/G8H medium borderline