PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2446
Candidate Protein Records
2044
Pathway-Level Records
5198
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Garb04G0028980 Alkaloid GES low borderline
Garb04G0028990 Alkaloid GES medium pass
Garb04G0033130 Alkaloid GES medium pass
Garb04G0033180 Alkaloid GES medium pass
Garb04G0033190 Alkaloid GES medium pass
Garb04G0033200 Alkaloid GES medium pass
Garb04G0033220 Alkaloid GES medium pass
Garb04G0033230 Alkaloid GES medium pass
Garb04G0033720 Alkaloid GES medium pass
Garb07G0020280 Alkaloid GES medium pass
Garb07G0020290 Alkaloid GES medium pass
Garb07G0020320 Alkaloid GES medium pass
Garb07G0023130 Alkaloid GES medium pass
Garb07G0024190 Alkaloid GES medium pass
Garb07G0035330 Alkaloid GES medium pass
Garb07G0035340 Alkaloid GES medium pass
Garb09G0014710 Alkaloid GES medium pass
Garb09G0022350 Alkaloid GES medium pass
Garb10G0003060 Alkaloid GES medium pass
Garb10G0006410 Alkaloid GES medium pass
Garb10G0014910 Alkaloid GES medium pass
Garb10G0014940 Alkaloid GES low borderline
Garb10G0014950 Alkaloid GES medium pass
Garb10G0016160 Alkaloid GES medium pass
Garb10G0016210 Alkaloid GES medium pass
Garb10G0016220 Alkaloid GES medium pass
Garb10G0016240 Alkaloid GES medium pass
Garb10G0016250 Alkaloid GES medium pass
Garb10G0024020 Alkaloid GES medium pass
Garb10G0024030 Alkaloid GES medium pass
Garb10G0024050 Alkaloid GES medium pass
Garb10G0024540 Alkaloid GES medium pass
Garb10G0024550 Alkaloid GES medium pass
Garb10G0024590 Alkaloid GES medium pass
Garb10G0026730 Alkaloid GES medium pass
Garb10G0038250 Alkaloid GES medium pass
Garb10G0038260 Alkaloid GES medium pass
Garb10G0039650 Alkaloid GES medium pass
Garb10G0039670 Alkaloid GES medium pass
Garb11G0007150 Alkaloid GES medium pass
Garb11G0031920 Alkaloid GES medium pass
Garb11G0031930 Alkaloid GES medium pass
Garb11G0033890 Alkaloid GES medium pass
Garb12G0009530 Alkaloid GES low borderline
Garb12G0023220 Alkaloid GES medium pass
Garb12G0023230 Alkaloid GES medium pass
Garb13G0002150 Alkaloid GES medium pass
Garb13G0002160 Alkaloid GES medium pass
Garb13G0027880 Alkaloid GES medium pass
Garb13G0027900 Alkaloid GES low borderline