PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Garb10G0012930 Steroid BR6OX2/CYP85A2 low borderline
Garb10G0014550 Steroid BR6OX2/CYP85A2 low borderline
Garb10G0023140 Steroid BR6OX2/CYP85A2 low borderline
Garb10G0024670 Steroid BR6OX2/CYP85A2 low borderline
Garb10G0026530 Steroid BR6OX2/CYP85A2 low borderline
Garb10G0027050 Steroid BR6OX2/CYP85A2 low borderline
Garb10G0029120 Steroid BR6OX2/CYP85A2 low borderline
Garb10G0030680 Steroid BR6OX2/CYP85A2 medium borderline
Garb10G0032060 Steroid BR6OX2/CYP85A2 low borderline
Garb10G0034810 Steroid BR6OX2/CYP85A2 low borderline
Garb10G0038730 Steroid BR6OX2/CYP85A2 low borderline
Garb11G0000230 Steroid BR6OX2/CYP85A2 low borderline
Garb11G0000350 Steroid BR6OX2/CYP85A2 low borderline
Garb11G0000360 Steroid BR6OX2/CYP85A2 low borderline
Garb11G0000840 Steroid BR6OX2/CYP85A2 medium borderline
Garb11G0001610 Steroid BR6OX2/CYP85A2 low borderline
Garb11G0003840 Steroid BR6OX2/CYP85A2 low borderline
Garb11G0018250 Steroid BR6OX2/CYP85A2 low borderline
Garb11G0019100 Steroid BR6OX2/CYP85A2 low borderline
Garb11G0024410 Steroid BR6OX2/CYP85A2 low borderline
Garb12G0017310 Steroid BR6OX2/CYP85A2 low borderline
Garb12G0027800 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0002860 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0004010 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0004930 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0010830 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0011620 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0013810 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0014480 Steroid BR6OX2/CYP85A2 low borderline
Garb13G0033400 Steroid BR6OX2/CYP85A2 low borderline
Garb01G0013290 Steroid CAS medium pass
Garb03G0000390 Steroid CAS medium pass
Garb03G0002180 Steroid CAS medium pass
Garb03G0005030 Steroid CAS medium pass
Garb04G0000560 Steroid CAS medium pass
Garb04G0000660 Steroid CAS medium pass
Garb04G0004930 Steroid CAS medium pass
Garb04G0004940 Steroid CAS medium pass
Garb04G0006080 Steroid CAS medium pass
Garb04G0013090 Steroid CAS medium pass
Garb04G0018640 Steroid CAS medium pass
Garb04G0019890 Steroid CAS low borderline
Garb04G0026040 Steroid CAS low borderline
Garb04G0033130 Steroid CAS low borderline
Garb04G0033200 Steroid CAS low borderline
Garb04G0033720 Steroid CAS medium pass
Garb07G0020320 Steroid CAS medium pass
Garb07G0024190 Steroid CAS medium pass
Garb08G0011230 Steroid CAS medium pass
Garb08G0014220 Steroid CAS medium pass