PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Garb11G0028010 Flavonoid DFR medium pass
Garb13G0012330 Flavonoid DFR low borderline
Garb13G0021570 Flavonoid DFR medium borderline
Garb01G0007000 Flavonoid F3'5'H/CYP75A medium borderline
Garb01G0015890 Flavonoid F3'5'H/CYP75A medium borderline
Garb01G0017310 Flavonoid F3'5'H/CYP75A medium borderline
Garb01G0017320 Flavonoid F3'5'H/CYP75A medium borderline
Garb02G0007790 Flavonoid F3'5'H/CYP75A medium borderline
Garb02G0009130 Flavonoid F3'5'H/CYP75A medium borderline
Garb02G0010570 Flavonoid F3'5'H/CYP75A medium borderline
Garb02G0015850 Flavonoid F3'5'H/CYP75A medium borderline
Garb03G0018030 Flavonoid F3'5'H/CYP75A medium borderline
Garb03G0027810 Flavonoid F3'5'H/CYP75A medium borderline
Garb04G0000450 Flavonoid F3'5'H/CYP75A medium borderline
Garb04G0007000 Flavonoid F3'5'H/CYP75A medium borderline
Garb04G0013640 Flavonoid F3'5'H/CYP75A medium borderline
Garb04G0020150 Flavonoid F3'5'H/CYP75A medium borderline
Garb04G0020170 Flavonoid F3'5'H/CYP75A medium borderline
Garb06G0012900 Flavonoid F3'5'H/CYP75A medium borderline
Garb06G0033100 Flavonoid F3'5'H/CYP75A medium borderline
Garb07G0002690 Flavonoid F3'5'H/CYP75A medium borderline
Garb07G0016040 Flavonoid F3'5'H/CYP75A medium borderline
Garb07G0024960 Flavonoid F3'5'H/CYP75A medium borderline
Garb07G0031650 Flavonoid F3'5'H/CYP75A medium borderline
Garb08G0008010 Flavonoid F3'5'H/CYP75A medium borderline
Garb08G0027210 Flavonoid F3'5'H/CYP75A medium borderline
Garb09G0000140 Flavonoid F3'5'H/CYP75A medium borderline
Garb09G0020440 Flavonoid F3'5'H/CYP75A medium borderline
Garb09G0022640 Flavonoid F3'5'H/CYP75A medium borderline
Garb09G0022660 Flavonoid F3'5'H/CYP75A medium borderline
Garb10G0029120 Flavonoid F3'5'H/CYP75A medium borderline
Garb11G0000230 Flavonoid F3'5'H/CYP75A medium borderline
Garb11G0003870 Flavonoid F3'5'H/CYP75A medium borderline
Garb12G0000130 Flavonoid F3'5'H/CYP75A medium borderline
Garb12G0026660 Flavonoid F3'5'H/CYP75A medium borderline
Garb13G0011020 Flavonoid F3'5'H/CYP75A low borderline
Garb13G0016570 Flavonoid F3'5'H/CYP75A medium borderline
Garb13G0033400 Flavonoid F3'5'H/CYP75A medium borderline
Garb01G0003300 Flavonoid F3'H/CYP75B low borderline
Garb01G0017770 Flavonoid F3'H/CYP75B low borderline
Garb01G0031040 Flavonoid F3'H/CYP75B low borderline
Garb01G0031060 Flavonoid F3'H/CYP75B medium borderline
Garb01G0034500 Flavonoid F3'H/CYP75B low borderline
Garb01G0035180 Flavonoid F3'H/CYP75B low borderline
Garb02G0001010 Flavonoid F3'H/CYP75B medium borderline
Garb02G0003770 Flavonoid F3'H/CYP75B medium borderline
Garb02G0007300 Flavonoid F3'H/CYP75B medium borderline
Garb03G0000770 Flavonoid F3'H/CYP75B low borderline
Garb03G0004600 Flavonoid F3'H/CYP75B medium borderline
Garb04G0007040 Flavonoid F3'H/CYP75B medium borderline