PlantSME Plant secondary metabolism enzyme database

Gossypium arboreum (gossypium_arboreum)

Imported from atlas release summary for Gossypium arboreum.

2044
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 612 21 BAHD (203) View species results
Alkaloid pathway 464 25 7DLGT (81) View species results
Phenylpropanoid pathway 446 12 POD (173) View species results
Flavonoid pathway 238 13 UFGT (150) View species results
Rosmarinic acid pathway 159 7 C4H (69) View species results
Steroid pathway 125 12 CAS (59) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2100 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Garb05G0017840 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0000220 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0000230 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0000240 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0000880 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0001330 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0002420 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0005730 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0007190 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0007980 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0008480 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0013720 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0014420 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0016740 Phenylpropanoid C3'H/CYP98A high pass
Garb06G0017450 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0017470 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0018400 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0018810 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0020570 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0021640 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0022110 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0025190 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0025650 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0026500 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0028600 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0029000 Phenylpropanoid C3'H/CYP98A low borderline
Garb06G0030720 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0033100 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0033110 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0033130 Phenylpropanoid C3'H/CYP98A medium borderline
Garb06G0033920 Phenylpropanoid C3'H/CYP98A low borderline
Garb07G0002690 Phenylpropanoid C3'H/CYP98A medium pass
Garb07G0004100 Phenylpropanoid C3'H/CYP98A low borderline
Garb07G0006260 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0006290 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0006330 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0006350 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0006360 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0006370 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0006380 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0006400 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0006410 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0006420 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0007080 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0011720 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0011730 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0011740 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0011750 Phenylpropanoid C3'H/CYP98A medium borderline
Garb07G0013610 Phenylpropanoid C3'H/CYP98A low borderline
Garb07G0014280 Phenylpropanoid C3'H/CYP98A medium borderline